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The map label for this gene is ytfE [C]

Identifier: 119385749

GI number: 119385749

Start: 201003

End: 201674

Strand: Direct

Name: ytfE [C]

Synonym: Pden_3025

Alternate gene names: 119385749

Gene position: 201003-201674 (Clockwise)

Preceding gene: 119385742

Following gene: 119385750

Centisome position: 11.62

GC content: 67.86

Gene sequence:

>672_bases
ATGCCCCAGACCACATTCCCATTGCACGACCGGACGGTCGGCGAGATCGCCGCGCGGCTTCCCGGCGCGTCCGGCGTGTT
CCGCCGCTTCGGCATCGATTTCTGCTGCCACGGAGAGGTGCCGCTGGCAGAGGCAGCCAATCGGCGCCAGCTGGACCTTG
GCGCGCTCGAGGCGGTCCTGGGCGACCTCGATCCCCTGGCGATCCCCGATGCGCCACGGGAGACCGGGGCGCTGATCGAC
CATATCCAGACCCGCTATCACCAGGCGCATCGCCGGCAGATCCCCGAACTGATCGCGCTTTCGCGCAAGGTCGAGGCGGT
CCATGCCGGCCACCCGGAGGTGCCCGGCGGCCTGGCCGACCTGCTGCAGCGGATATGGGGCGAGTTGGAGGTGCATATGA
AGAAGGAAGAGTTGATCCTGTTCCCGGCCATGCGCCGGCAGGCGGCGGACCGGATTGCCGTCCCCATCGCCGAGATGCGG
CATGATCACGACGATCACGGCGCCTTCCTGGCAGAGCTGGCGCGGCTGACGCAGGACCATACCGTGCCCGAGGGCGCCTG
CCGGACCTGGCAGGCGCTTTACGCCGGGACCGCGCAGCTGCGGGCCGACCTGATGGAGCATATCCATCTGGAAAACAACG
TGCTGTTCCCGCGCTTTGAAAAGGGCGCATGA

Upstream 100 bases:

>100_bases
ATATTCGGTATTGCAAGTACCGAATATAAGGGCTTCGCGCATCCTCCTGACCCGCGGCGCCCGACTCACCATCAGACACC
CCCCGCTCATGGAGACCGCC

Downstream 100 bases:

>100_bases
GCCTGCTGCTGGAAGCCGGGCCGCTATTCATGCAATCCCGCGACGCTTGCCGCCGGCCCCGCATCCAATGCCCCGAAGCC
CGCCCCATGTGATCCAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPQTTFPLHDRTVGEIAARLPGASGVFRRFGIDFCCHGEVPLAEAANRRQLDLGALEAVLGDLDPLAIPDAPRETGALID
HIQTRYHQAHRRQIPELIALSRKVEAVHAGHPEVPGGLADLLQRIWGELEVHMKKEELILFPAMRRQAADRIAVPIAEMR
HDHDDHGAFLAELARLTQDHTVPEGACRTWQALYAGTAQLRADLMEHIHLENNVLFPRFEKGA

Sequences:

>Translated_223_residues
MPQTTFPLHDRTVGEIAARLPGASGVFRRFGIDFCCHGEVPLAEAANRRQLDLGALEAVLGDLDPLAIPDAPRETGALID
HIQTRYHQAHRRQIPELIALSRKVEAVHAGHPEVPGGLADLLQRIWGELEVHMKKEELILFPAMRRQAADRIAVPIAEMR
HDHDDHGAFLAELARLTQDHTVPEGACRTWQALYAGTAQLRADLMEHIHLENNVLFPRFEKGA
>Mature_222_residues
PQTTFPLHDRTVGEIAARLPGASGVFRRFGIDFCCHGEVPLAEAANRRQLDLGALEAVLGDLDPLAIPDAPRETGALIDH
IQTRYHQAHRRQIPELIALSRKVEAVHAGHPEVPGGLADLLQRIWGELEVHMKKEELILFPAMRRQAADRIAVPIAEMRH
DHDDHGAFLAELARLTQDHTVPEGACRTWQALYAGTAQLRADLMEHIHLENNVLFPRFEKGA

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=211, Percent_Identity=45.0236966824645, Blast_Score=181, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24855; Mature: 24724

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTTFPLHDRTVGEIAARLPGASGVFRRFGIDFCCHGEVPLAEAANRRQLDLGALEAVL
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCEEECCCCCHHHHCCCCCCHHHHHHHHH
GDLDPLAIPDAPRETGALIDHIQTRYHQAHRRQIPELIALSRKVEAVHAGHPEVPGGLAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LLQRIWGELEVHMKKEELILFPAMRRQAADRIAVPIAEMRHDHDDHGAFLAELARLTQDH
HHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHC
TVPEGACRTWQALYAGTAQLRADLMEHIHLENNVLFPRFEKGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PQTTFPLHDRTVGEIAARLPGASGVFRRFGIDFCCHGEVPLAEAANRRQLDLGALEAVL
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCEEECCCCCHHHHCCCCCCHHHHHHHHH
GDLDPLAIPDAPRETGALIDHIQTRYHQAHRRQIPELIALSRKVEAVHAGHPEVPGGLAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LLQRIWGELEVHMKKEELILFPAMRRQAADRIAVPIAEMRHDHDDHGAFLAELARLTQDH
HHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHC
TVPEGACRTWQALYAGTAQLRADLMEHIHLENNVLFPRFEKGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA