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The map label for this gene is 119385724

Identifier: 119385724

GI number: 119385724

Start: 173274

End: 174281

Strand: Direct

Name: 119385724

Synonym: Pden_3000

Alternate gene names: NA

Gene position: 173274-174281 (Clockwise)

Preceding gene: 119385723

Following gene: 119385725

Centisome position: 10.02

GC content: 73.41

Gene sequence:

>1008_bases
ATGATCGGTTTCGCCTGGCCGCCCGCGCTCTTCGCCCTGCCGCTGCTGCTGCTGCCGCTGGTCATCCGCTGGCTGCGGGC
ATCCGCCGTGCCGCGGCTGGACCTGCGGGCGGTCGAAGGACGCGCGGTCGGCCCGCTGTTGGTGGCGCTGGCGATGCTGG
CGCCGGCGGCACTGATCCTCGGCCTTGCCCAGCCCTATCTGCGCGGCGGCAGCACCGCCTATCGCGGCATCGGCACGAAC
CTGGTGCTGCTGATCGACCGCTCCTCCAGCATGGACGACACCTTCGCCGGGCGCTCGCCGCAAGGGGGCGACGAAAGCAA
GGCCGCCGCCGCGCGGCGTATCCTGCTGGACTTCATCGCCCGCCGTCCCGACGACCGCATCGGCATCGCCGCCTTTTCCA
CCGCGCCGATGCTGGTGCTGCCGATGACCGAAAGCCGGACCGCCATTGCCGCCGCCGTCGCCGCCCTGGCCGAGCCGGGC
CTGTCCCAGACCGATGTGGGCCGCGGCCTGACCCTGGCGATGGGGATGGCGCATGAGGCATCGGCCAGCGACTCGCGCGC
CGTGGTGCTGGTCAGCGACGGGGCGGCGGTCATCGCGCCCGAGGTCCAGACCGCGCTGCGCAACCTGGCGGCGCGCCGGC
AGGTCAACATCTATTGGCTCTACCTGCGCACCAAGGGCGCGAAGGGCATCTTCGAGGTGCCCGAGCCCGGCCAGGCCGAC
ACCCCGCACCTGCGCCCCGAGCGGCACCTGCATATCTTCCTGCAAAGCCTGGGCCTGCCCTATCACGCCTTCGAGGCCGA
CAGCCCCGGCGCGGTCGAGGACGCCGTGACCGAGATCGGGCGCATGGAATCCCGCCCCATCCTGACCCGCCGCCCGGTGC
CACGCCGCGACCTGGCCTGGGCCTGCCATCTGCTGGCCTCGCTGTGCTGCGCGGCGCTGGCGGCCGCCCGCTGGCTCGAG
CGGCGCTATGCCCCTCGCCGCCCCGCGCCCCTGCTGGTCCCGGCATGA

Upstream 100 bases:

>100_bases
TCGCAGCCTCCGACGCGGCCTTCTTCGGCCTGGGGTCAGGCCCCGCGCAGGACATCCCGCAACTCGCCCGCGACCTCGCG
GCCATCGAGCGGGGGCGGCG

Downstream 100 bases:

>100_bases
GACGGCTGGTCTTTCCCGCGCTGCTGGCCTGGGTCGCGCTCGCGGCCGGCGCGGTGCTGTGGTCGGGCTGGCAGCTTTGG
GGCGTGGCCACCGACAATCG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: MxaC Protein; Von Willebrand Factor Type A Domain Protein; MxaC-Like Protein

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIGFAWPPALFALPLLLLPLVIRWLRASAVPRLDLRAVEGRAVGPLLVALAMLAPAALILGLAQPYLRGGSTAYRGIGTN
LVLLIDRSSSMDDTFAGRSPQGGDESKAAAARRILLDFIARRPDDRIGIAAFSTAPMLVLPMTESRTAIAAAVAALAEPG
LSQTDVGRGLTLAMGMAHEASASDSRAVVLVSDGAAVIAPEVQTALRNLAARRQVNIYWLYLRTKGAKGIFEVPEPGQAD
TPHLRPERHLHIFLQSLGLPYHAFEADSPGAVEDAVTEIGRMESRPILTRRPVPRRDLAWACHLLASLCCAALAAARWLE
RRYAPRRPAPLLVPA

Sequences:

>Translated_335_residues
MIGFAWPPALFALPLLLLPLVIRWLRASAVPRLDLRAVEGRAVGPLLVALAMLAPAALILGLAQPYLRGGSTAYRGIGTN
LVLLIDRSSSMDDTFAGRSPQGGDESKAAAARRILLDFIARRPDDRIGIAAFSTAPMLVLPMTESRTAIAAAVAALAEPG
LSQTDVGRGLTLAMGMAHEASASDSRAVVLVSDGAAVIAPEVQTALRNLAARRQVNIYWLYLRTKGAKGIFEVPEPGQAD
TPHLRPERHLHIFLQSLGLPYHAFEADSPGAVEDAVTEIGRMESRPILTRRPVPRRDLAWACHLLASLCCAALAAARWLE
RRYAPRRPAPLLVPA
>Mature_335_residues
MIGFAWPPALFALPLLLLPLVIRWLRASAVPRLDLRAVEGRAVGPLLVALAMLAPAALILGLAQPYLRGGSTAYRGIGTN
LVLLIDRSSSMDDTFAGRSPQGGDESKAAAARRILLDFIARRPDDRIGIAAFSTAPMLVLPMTESRTAIAAAVAALAEPG
LSQTDVGRGLTLAMGMAHEASASDSRAVVLVSDGAAVIAPEVQTALRNLAARRQVNIYWLYLRTKGAKGIFEVPEPGQAD
TPHLRPERHLHIFLQSLGLPYHAFEADSPGAVEDAVTEIGRMESRPILTRRPVPRRDLAWACHLLASLCCAALAAARWLE
RRYAPRRPAPLLVPA

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35919; Mature: 35919

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFAWPPALFALPLLLLPLVIRWLRASAVPRLDLRAVEGRAVGPLLVALAMLAPAALIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
GLAQPYLRGGSTAYRGIGTNLVLLIDRSSSMDDTFAGRSPQGGDESKAAAARRILLDFIA
HHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
RRPDDRIGIAAFSTAPMLVLPMTESRTAIAAAVAALAEPGLSQTDVGRGLTLAMGMAHEA
CCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCCCC
SASDSRAVVLVSDGAAVIAPEVQTALRNLAARRQVNIYWLYLRTKGAKGIFEVPEPGQAD
CCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCEEEEEEEEEEECCCCCEEECCCCCCCC
TPHLRPERHLHIFLQSLGLPYHAFEADSPGAVEDAVTEIGRMESRPILTRRPVPRRDLAW
CCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ACHLLASLCCAALAAARWLERRYAPRRPAPLLVPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIGFAWPPALFALPLLLLPLVIRWLRASAVPRLDLRAVEGRAVGPLLVALAMLAPAALIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH
GLAQPYLRGGSTAYRGIGTNLVLLIDRSSSMDDTFAGRSPQGGDESKAAAARRILLDFIA
HHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH
RRPDDRIGIAAFSTAPMLVLPMTESRTAIAAAVAALAEPGLSQTDVGRGLTLAMGMAHEA
CCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCCCCC
SASDSRAVVLVSDGAAVIAPEVQTALRNLAARRQVNIYWLYLRTKGAKGIFEVPEPGQAD
CCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCEEEEEEEEEEECCCCCEEECCCCCCCC
TPHLRPERHLHIFLQSLGLPYHAFEADSPGAVEDAVTEIGRMESRPILTRRPVPRRDLAW
CCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ACHLLASLCCAALAAARWLERRYAPRRPAPLLVPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA