Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is ubiG [H]

Identifier: 119385708

GI number: 119385708

Start: 158815

End: 159498

Strand: Direct

Name: ubiG [H]

Synonym: Pden_2984

Alternate gene names: 119385708

Gene position: 158815-159498 (Clockwise)

Preceding gene: 119385707

Following gene: 119385710

Centisome position: 9.18

GC content: 69.01

Gene sequence:

>684_bases
ATGAGCGTGGCGCCGAAAACCGCCGCCGCGATGACCGTGCATTGGGACGGGCGGGCGCATCGCTTCGAGGGGGCCGCCTC
GCATAACCGCGACCGGGATGCGTGGCGGGACGTGCTGGCGGCGGCGGTCGGGCAGGGCGCGCAACGCGTCGTGGATCTGG
GCTGCGGGACCGGCGCCTGCGCGGTGTTGCTGGCGGGCATGGGGCATCATGTCACGGGCGTCGATGGCTCGTCCGCCATG
TTGGCGGAAGCACGCCGTGCCGCCGCGCGTGACGGTGTTCATGTGGACTTCATCCATGCCGACATGGACCAGTGCGGGCT
TGCCAATGGCGCGGCCGACGTGGTCACCCTGCGCAATGTGCTCTGGACGCTGGAAGACCCGGCCGAGGCCCTGCACCTGG
CGGCCCGTCTGCTGCGCCCCGGCGGCAAGGTTCTGGTCTCGGACGGGGTCTGGCGGCGTAACCCCGACCCGACGATGGCG
GATCTTGCCGCCCATCTTCCCAACGCCTGCGGTGTCAGCGAAGTCGAAGCGCGTGACTGGCTTTGCGGGGCGGGCTTCGG
GGGCATCACCGTATGGCATGACCGCTTCGTCCACCACCCCTATGGCGGGCTTTACGACGAACCCGAGACACCGATTCCCT
TCTTCGTCCTGACGGCAATCAGGGCTGAGGCCACCAGATCCTGA

Upstream 100 bases:

>100_bases
TCGGCGATGCGCCACTGGAAGGGGTAGAGCTGCCCGAGAACATGCCGCAGGGCGCGAAGGACCGCTTCGCGCAAATCGTC
GAGCGCGCCGGGGCCGGGGA

Downstream 100 bases:

>100_bases
TTGGGATCAATCCTCCTCGAAGCTGAAGATCGCCAGGCTGCGCTCGCGCTCGTTCACGCGCAGGCGGCGGTTGATCGGGG
CATGGGCGCGGGCCGAGCAA

Product: methyltransferase type 11

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSVAPKTAAAMTVHWDGRAHRFEGAASHNRDRDAWRDVLAAAVGQGAQRVVDLGCGTGACAVLLAGMGHHVTGVDGSSAM
LAEARRAAARDGVHVDFIHADMDQCGLANGAADVVTLRNVLWTLEDPAEALHLAARLLRPGGKVLVSDGVWRRNPDPTMA
DLAAHLPNACGVSEVEARDWLCGAGFGGITVWHDRFVHHPYGGLYDEPETPIPFFVLTAIRAEATRS

Sequences:

>Translated_227_residues
MSVAPKTAAAMTVHWDGRAHRFEGAASHNRDRDAWRDVLAAAVGQGAQRVVDLGCGTGACAVLLAGMGHHVTGVDGSSAM
LAEARRAAARDGVHVDFIHADMDQCGLANGAADVVTLRNVLWTLEDPAEALHLAARLLRPGGKVLVSDGVWRRNPDPTMA
DLAAHLPNACGVSEVEARDWLCGAGFGGITVWHDRFVHHPYGGLYDEPETPIPFFVLTAIRAEATRS
>Mature_226_residues
SVAPKTAAAMTVHWDGRAHRFEGAASHNRDRDAWRDVLAAAVGQGAQRVVDLGCGTGACAVLLAGMGHHVTGVDGSSAML
AEARRAAARDGVHVDFIHADMDQCGLANGAADVVTLRNVLWTLEDPAEALHLAARLLRPGGKVLVSDGVWRRNPDPTMAD
LAAHLPNACGVSEVEARDWLCGAGFGGITVWHDRFVHHPYGGLYDEPETPIPFFVLTAIRAEATRS

Specific function: Ubiquinone biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 24096; Mature: 23965

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAPKTAAAMTVHWDGRAHRFEGAASHNRDRDAWRDVLAAAVGQGAQRVVDLGCGTGAC
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHH
AVLLAGMGHHVTGVDGSSAMLAEARRAAARDGVHVDFIHADMDQCGLANGAADVVTLRNV
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHH
LWTLEDPAEALHLAARLLRPGGKVLVSDGVWRRNPDPTMADLAAHLPNACGVSEVEARDW
HHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCC
LCGAGFGGITVWHDRFVHHPYGGLYDEPETPIPFFVLTAIRAEATRS
EEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVAPKTAAAMTVHWDGRAHRFEGAASHNRDRDAWRDVLAAAVGQGAQRVVDLGCGTGAC
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHH
AVLLAGMGHHVTGVDGSSAMLAEARRAAARDGVHVDFIHADMDQCGLANGAADVVTLRNV
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHH
LWTLEDPAEALHLAARLLRPGGKVLVSDGVWRRNPDPTMADLAAHLPNACGVSEVEARDW
HHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHCC
LCGAGFGGITVWHDRFVHHPYGGLYDEPETPIPFFVLTAIRAEATRS
EEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA