| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358482
Identifier: 119358482
GI number: 119358482
Start: 3108150
End: 3109034
Strand: Reverse
Name: 119358482
Synonym: Cpha266_2718
Alternate gene names: NA
Gene position: 3109034-3108150 (Counterclockwise)
Preceding gene: 119358483
Following gene: 119358481
Centisome position: 99.21
GC content: 48.59
Gene sequence:
>885_bases ATGACGCATATGCATGATCCCGAACAAAAAGGGGAGAGGCTCCCCGACATTGAGCTTGACACTGAAGATCGGTCAGACGG ATCAGGGCCCCTTGAGCCCGCCGACAGCGGGAGCTGGAAGGCACTGTTCCTGATTCTGTTTCTTGTCGTTATAGGGCTTG GCTGGCTCGGATACCATGCTTCTGACTGGCAGAAAGAGGTTCGCGTCAGAGAGATCGTTATCGAAGACGCCAGGTATGTT TCCGTACAGGAACTTTCCGCAAGGTTGAAAAGGTATTCGGGGATGAAAGTTCATGCGCTTGATATTGATAAGGTGAGGGC TTCAGTCATGGCAATTCCCTATATTCGGGACGCAGCGGTCAGTAAAGAGCTTAACGGGATTCTTCGTGTAAGAGTCGTAG AGCGGGAACCGCTTGCGCTCTTGATTGACATGCCGACGCCGATGGTTATCGATCAGGACGGGGTGCTTGTTCCCGACCAT AAAGGGTTTTCAGACCGTTCAGGAACGCTCCTTCATGTTTCAGGCATCACCAGACTGGATCATGCCGAAAGGGGATTGCG AAAACTATCGGCAAGGGATTATGCCCTTGTGCACGAATTCACAACAGCCTTGCAGAAGAGCGATTATGCCGCACTGCTTG TACGTGAATTTCATTTTCAAAACAATAACGGCTCCTCGGTTTTTGCAAGAGGATCCAGGAGCCGTTTTATTATGGGTAAT GACGGGAATTTCAAGGAAAAGTTGAAAAAATTCGAGATATTCTGGCAAAAGGTCGTTTCCAAAAAAGGTTTCGAAAGATA TGAAACTGTGGATCTGCGCTTCAAGGACAGAGTTTTTGCCACGGAAGTACAGTTGCCGGAAATTGTTCGTAAGGATTCGA TGTGA
Upstream 100 bases:
>100_bases CAGGTTGTTATATCGTTCACAGGAAAAGATCGCAAGATGGGATGATTCCGATGCTTCGCAGCGGTTCATTCGGCATATGG GAAGCCCGGAGATCCAAAAG
Downstream 100 bases:
>100_bases TAAATCATGGAATATGGAAAAATGCTGAAAAGCAATATAGCGGTAGGGCTTGATATCGGGACAACAAAGGTCTGCGTTGT TGTTGCCGAAAAAGATGAAA
Product: polypeptide-transport-associated domain-containing protein
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTHMHDPEQKGERLPDIELDTEDRSDGSGPLEPADSGSWKALFLILFLVVIGLGWLGYHASDWQKEVRVREIVIEDARYV SVQELSARLKRYSGMKVHALDIDKVRASVMAIPYIRDAAVSKELNGILRVRVVEREPLALLIDMPTPMVIDQDGVLVPDH KGFSDRSGTLLHVSGITRLDHAERGLRKLSARDYALVHEFTTALQKSDYAALLVREFHFQNNNGSSVFARGSRSRFIMGN DGNFKEKLKKFEIFWQKVVSKKGFERYETVDLRFKDRVFATEVQLPEIVRKDSM
Sequences:
>Translated_294_residues MTHMHDPEQKGERLPDIELDTEDRSDGSGPLEPADSGSWKALFLILFLVVIGLGWLGYHASDWQKEVRVREIVIEDARYV SVQELSARLKRYSGMKVHALDIDKVRASVMAIPYIRDAAVSKELNGILRVRVVEREPLALLIDMPTPMVIDQDGVLVPDH KGFSDRSGTLLHVSGITRLDHAERGLRKLSARDYALVHEFTTALQKSDYAALLVREFHFQNNNGSSVFARGSRSRFIMGN DGNFKEKLKKFEIFWQKVVSKKGFERYETVDLRFKDRVFATEVQLPEIVRKDSM >Mature_293_residues THMHDPEQKGERLPDIELDTEDRSDGSGPLEPADSGSWKALFLILFLVVIGLGWLGYHASDWQKEVRVREIVIEDARYVS VQELSARLKRYSGMKVHALDIDKVRASVMAIPYIRDAAVSKELNGILRVRVVEREPLALLIDMPTPMVIDQDGVLVPDHK GFSDRSGTLLHVSGITRLDHAERGLRKLSARDYALVHEFTTALQKSDYAALLVREFHFQNNNGSSVFARGSRSRFIMGND GNFKEKLKKFEIFWQKVVSKKGFERYETVDLRFKDRVFATEVQLPEIVRKDSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33571; Mature: 33440
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHMHDPEQKGERLPDIELDTEDRSDGSGPLEPADSGSWKALFLILFLVVIGLGWLGYHA CCCCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SDWQKEVRVREIVIEDARYVSVQELSARLKRYSGMKVHALDIDKVRASVMAIPYIRDAAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHH SKELNGILRVRVVEREPLALLIDMPTPMVIDQDGVLVPDHKGFSDRSGTLLHVSGITRLD HHHHCCEEEEEEECCCCEEEEEECCCCEEECCCCEECCCCCCCCCCCCCEEEECCCCHHH HAERGLRKLSARDYALVHEFTTALQKSDYAALLVREFHFQNNNGSSVFARGSRSRFIMGN HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECC DGNFKEKLKKFEIFWQKVVSKKGFERYETVDLRFKDRVFATEVQLPEIVRKDSM CCCHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCEEEECCCCHHHHHCCCC >Mature Secondary Structure THMHDPEQKGERLPDIELDTEDRSDGSGPLEPADSGSWKALFLILFLVVIGLGWLGYHA CCCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SDWQKEVRVREIVIEDARYVSVQELSARLKRYSGMKVHALDIDKVRASVMAIPYIRDAAV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHH SKELNGILRVRVVEREPLALLIDMPTPMVIDQDGVLVPDHKGFSDRSGTLLHVSGITRLD HHHHCCEEEEEEECCCCEEEEEECCCCEEECCCCEECCCCCCCCCCCCCEEEECCCCHHH HAERGLRKLSARDYALVHEFTTALQKSDYAALLVREFHFQNNNGSSVFARGSRSRFIMGN HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECC DGNFKEKLKKFEIFWQKVVSKKGFERYETVDLRFKDRVFATEVQLPEIVRKDSM CCCHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCEEEECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA