| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358452
Identifier: 119358452
GI number: 119358452
Start: 3083008
End: 3084300
Strand: Reverse
Name: 119358452
Synonym: Cpha266_2688
Alternate gene names: NA
Gene position: 3084300-3083008 (Counterclockwise)
Preceding gene: 119358453
Following gene: 119358451
Centisome position: 98.42
GC content: 51.59
Gene sequence:
>1293_bases ATGCCTCCTGAACGAAAAAAACCAATCAAGCCGGTCATACTGCCTGGAGATGCGCAGCTTGTTGCAAAACTCCAGCAGGA TAACAAGCGCATACAGGAAGAACTTGGAAAAGCTCAGGAAGAGCTGAAAAGCGCAACGGTGAAAATGCAGACGCAAGAGA GAGCGCGCAGCAAAATCGAAGCCGAACTTCTCAGGCTCAAGCCCGCATCCCGGCTTCTTGATACGGTCACAGCCGATTCG GAAGGGTTATGGACAGGATTGAGAAGCGCCATAACCGAGATCTCCAAAAAGGATGCTGCCCTGAAAGAGCAGCTTCAGAT TGCAGAAAAAAAAGAGTCCGAATATCAGGCCGGAACAACAACGTTGCGCTCGGAGCTCGATCTGGTTCTTAAAAGGGAGC AGAGCGGTCAGATCAAAGCGCTTGCGCAGATTACGGAACTGCAGAAATCCCTGAAAACAGCAGAGCGCGAACACGTGGCA TTCGCGCAGCAGGCTGCGGTTAAAGAAGCCGGCTGGACCCGGGAGCAGGATGCGCTTAAAGATGCGCTCAAAAAAAGCGA GACCCGTTTTCAGGCGACAGAGAGAACCCTGACGGAGTATCGTAAATCGGAAGAGCTTTTTACCGCATCGCTTGCCGCCT TGCACCCAGCCGTTCCCTCACTTGCCGGAGTAGAGCCAAAACCGGTTTCCGTTATGAAGGCCCTCTTTCAGGAGCTTCTC GAAGCTCGCCAGCAGCTTGGACGAGTGAGCGCGCTCGAAGCGCAGTTAAAGGAAGAGCAGGCTAAAAATGCGGCCTCAGA TAAACTTGACAGCAGAATCGGAAGTCTTGTCGAAGAGAACAGGTTGTTGCAGGAGCAGCTTGACGGATTGAGCACCGACA GCAAACTCTTTGCCGAAAAGGCAAAAGAGGCCACAGCAACGCTTGAAACCGCCGTTGCCAATGCGAAAGCGTCGGCATCG GCAGAAACAGAAAAACAGAGGATCGATCTCGACAGAAAAGTATCGAAGCTCGAAGCTGAAAACGTATCGCTTCTTCAGCA GATGGACAGTACGCATAAAGTTGCCTTTGTTCCGCCGGAAAGAGTTTCCGCCCTGCTTGACGAATTCTATGCCAACATTC GTACCAACCTCAAAGGGCTTGATGTTCAGGACAGCGAGGTTCGTCTGAAAGTCGGGTTTGGCTCGTTATCCTCCGGTCAT ACAGGTTTTGTTATTCCAACCGCAGGGAACACCGCAGAGATTAAGGACAGTCTTGGAGAGGTTGTACTTCGGCTTGGAAA AAAAGATCGCTGA
Upstream 100 bases:
>100_bases TGCGGGCGAGATGAACCTCTGGACAGTCAAGGTGACCGACGGCAAAGCCCGGACCGTTCGCACCATTACCATTGAAGACA AGAAATAAACAAGAGAATCC
Downstream 100 bases:
>100_bases GTTTCAGCAGAACAAACAGGGTACTCACGTCATATCTCCCTGCGACTTATCGGGACGCCTTGACCCGGGCACATCTGAAA AGATGTGCCCGAAATCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPPERKKPIKPVILPGDAQLVAKLQQDNKRIQEELGKAQEELKSATVKMQTQERARSKIEAELLRLKPASRLLDTVTADS EGLWTGLRSAITEISKKDAALKEQLQIAEKKESEYQAGTTTLRSELDLVLKREQSGQIKALAQITELQKSLKTAEREHVA FAQQAAVKEAGWTREQDALKDALKKSETRFQATERTLTEYRKSEELFTASLAALHPAVPSLAGVEPKPVSVMKALFQELL EARQQLGRVSALEAQLKEEQAKNAASDKLDSRIGSLVEENRLLQEQLDGLSTDSKLFAEKAKEATATLETAVANAKASAS AETEKQRIDLDRKVSKLEAENVSLLQQMDSTHKVAFVPPERVSALLDEFYANIRTNLKGLDVQDSEVRLKVGFGSLSSGH TGFVIPTAGNTAEIKDSLGEVVLRLGKKDR
Sequences:
>Translated_430_residues MPPERKKPIKPVILPGDAQLVAKLQQDNKRIQEELGKAQEELKSATVKMQTQERARSKIEAELLRLKPASRLLDTVTADS EGLWTGLRSAITEISKKDAALKEQLQIAEKKESEYQAGTTTLRSELDLVLKREQSGQIKALAQITELQKSLKTAEREHVA FAQQAAVKEAGWTREQDALKDALKKSETRFQATERTLTEYRKSEELFTASLAALHPAVPSLAGVEPKPVSVMKALFQELL EARQQLGRVSALEAQLKEEQAKNAASDKLDSRIGSLVEENRLLQEQLDGLSTDSKLFAEKAKEATATLETAVANAKASAS AETEKQRIDLDRKVSKLEAENVSLLQQMDSTHKVAFVPPERVSALLDEFYANIRTNLKGLDVQDSEVRLKVGFGSLSSGH TGFVIPTAGNTAEIKDSLGEVVLRLGKKDR >Mature_429_residues PPERKKPIKPVILPGDAQLVAKLQQDNKRIQEELGKAQEELKSATVKMQTQERARSKIEAELLRLKPASRLLDTVTADSE GLWTGLRSAITEISKKDAALKEQLQIAEKKESEYQAGTTTLRSELDLVLKREQSGQIKALAQITELQKSLKTAEREHVAF AQQAAVKEAGWTREQDALKDALKKSETRFQATERTLTEYRKSEELFTASLAALHPAVPSLAGVEPKPVSVMKALFQELLE ARQQLGRVSALEAQLKEEQAKNAASDKLDSRIGSLVEENRLLQEQLDGLSTDSKLFAEKAKEATATLETAVANAKASASA ETEKQRIDLDRKVSKLEAENVSLLQQMDSTHKVAFVPPERVSALLDEFYANIRTNLKGLDVQDSEVRLKVGFGSLSSGHT GFVIPTAGNTAEIKDSLGEVVLRLGKKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47410; Mature: 47279
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPERKKPIKPVILPGDAQLVAKLQQDNKRIQEELGKAQEELKSATVKMQTQERARSKIE CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELLRLKPASRLLDTVTADSEGLWTGLRSAITEISKKDAALKEQLQIAEKKESEYQAGTT HHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRSELDLVLKREQSGQIKALAQITELQKSLKTAEREHVAFAQQAAVKEAGWTREQDALK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DALKKSETRFQATERTLTEYRKSEELFTASLAALHPAVPSLAGVEPKPVSVMKALFQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH EARQQLGRVSALEAQLKEEQAKNAASDKLDSRIGSLVEENRLLQEQLDGLSTDSKLFAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AKEATATLETAVANAKASASAETEKQRIDLDRKVSKLEAENVSLLQQMDSTHKVAFVPPE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH RVSALLDEFYANIRTNLKGLDVQDSEVRLKVGFGSLSSGHTGFVIPTAGNTAEIKDSLGE HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHH VVLRLGKKDR HHHHHCCCCC >Mature Secondary Structure PPERKKPIKPVILPGDAQLVAKLQQDNKRIQEELGKAQEELKSATVKMQTQERARSKIE CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELLRLKPASRLLDTVTADSEGLWTGLRSAITEISKKDAALKEQLQIAEKKESEYQAGTT HHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRSELDLVLKREQSGQIKALAQITELQKSLKTAEREHVAFAQQAAVKEAGWTREQDALK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DALKKSETRFQATERTLTEYRKSEELFTASLAALHPAVPSLAGVEPKPVSVMKALFQELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH EARQQLGRVSALEAQLKEEQAKNAASDKLDSRIGSLVEENRLLQEQLDGLSTDSKLFAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AKEATATLETAVANAKASASAETEKQRIDLDRKVSKLEAENVSLLQQMDSTHKVAFVPPE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH RVSALLDEFYANIRTNLKGLDVQDSEVRLKVGFGSLSSGHTGFVIPTAGNTAEIKDSLGE HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHH VVLRLGKKDR HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA