| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358447
Identifier: 119358447
GI number: 119358447
Start: 3078225
End: 3078836
Strand: Direct
Name: 119358447
Synonym: Cpha266_2683
Alternate gene names: NA
Gene position: 3078225-3078836 (Clockwise)
Preceding gene: 119358446
Following gene: 119358448
Centisome position: 98.22
GC content: 45.92
Gene sequence:
>612_bases ATGGAGATGGAGGCTACTGGAAAAAGCCGGGGTGAATGGATTTTTCACGATGAGTTTGATCGGACGGTGAGTTACCTTTC CGACCATGCTAAAATTCTCGGGTTCAATCCGTTCTGTTACAAGGTTGAACGCGTTGACCTTGAAAACGTTTTCAAGTGGC ATTTTCGCGTTACCGATCCACAGAACAACCCGTTCGATGTTATTTTTTATGTCAAACAGTTCGACGAAATCCTCGTAGAG CTGCCACCTGACCTTCAGTGCGATAATCCTGACGAGCTGAGCGACGAGATGATCAAGGCCTATACGGTGGGGAAAAAAAT CTGTTGGCGACACCATCCTCTCATGAACCCCGTTGATGATCCGAAAAATTATCTGTTCGAGGGAAAAGCGTTTGCCGAAA TGTATGTTCACCCGGTCATGACCGGAAAAACAAGGGTTCATTTCGATCTTAAAATCAATGTGAAGTTTGTGCTCTACCCT GCGTTTCGCATCATTCCCGAGCAGATCATTCGAGCCATGACCAATGCGGGCATGTCGATAATCATGCAGACGGCTACAAA CAAGATGTTTCAAGGCATATCGAAAGACTTCGGGTTTACTGAACATGCATGA
Upstream 100 bases:
>100_bases GAGTGTCGCTCTTTTATTGTCTGTTTGTCTGTATATTTTATACGGTAACGAATTATGAACGGCAGCCCGAAAGAGCCGCT GAAGAAACGGAGTATCGCTC
Downstream 100 bases:
>100_bases AAAACTGACCTCGATGAATTTTCACGACCTTGTGAAAAATCGCTGCAGCATTCGCAGCTTCGTGAGCGATCGAAAAATTC CGCAGGAGATCCTCGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEMEATGKSRGEWIFHDEFDRTVSYLSDHAKILGFNPFCYKVERVDLENVFKWHFRVTDPQNNPFDVIFYVKQFDEILVE LPPDLQCDNPDELSDEMIKAYTVGKKICWRHHPLMNPVDDPKNYLFEGKAFAEMYVHPVMTGKTRVHFDLKINVKFVLYP AFRIIPEQIIRAMTNAGMSIIMQTATNKMFQGISKDFGFTEHA
Sequences:
>Translated_203_residues MEMEATGKSRGEWIFHDEFDRTVSYLSDHAKILGFNPFCYKVERVDLENVFKWHFRVTDPQNNPFDVIFYVKQFDEILVE LPPDLQCDNPDELSDEMIKAYTVGKKICWRHHPLMNPVDDPKNYLFEGKAFAEMYVHPVMTGKTRVHFDLKINVKFVLYP AFRIIPEQIIRAMTNAGMSIIMQTATNKMFQGISKDFGFTEHA >Mature_203_residues MEMEATGKSRGEWIFHDEFDRTVSYLSDHAKILGFNPFCYKVERVDLENVFKWHFRVTDPQNNPFDVIFYVKQFDEILVE LPPDLQCDNPDELSDEMIKAYTVGKKICWRHHPLMNPVDDPKNYLFEGKAFAEMYVHPVMTGKTRVHFDLKINVKFVLYP AFRIIPEQIIRAMTNAGMSIIMQTATNKMFQGISKDFGFTEHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23795; Mature: 23795
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMEATGKSRGEWIFHDEFDRTVSYLSDHAKILGFNPFCYKVERVDLENVFKWHFRVTDP CCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEECCHHEEEEEECCHHHEEEEEEEEECC QNNPFDVIFYVKQFDEILVELPPDLQCDNPDELSDEMIKAYTVGKKICWRHHPLMNPVDD CCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PKNYLFEGKAFAEMYVHPVMTGKTRVHFDLKINVKFVLYPAFRIIPEQIIRAMTNAGMSI CHHHEECCHHHHHHHHHHEECCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHCCHHE IMQTATNKMFQGISKDFGFTEHA EHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEMEATGKSRGEWIFHDEFDRTVSYLSDHAKILGFNPFCYKVERVDLENVFKWHFRVTDP CCCCCCCCCCCCEEEECHHHHHHHHHHCCCEEEECCHHEEEEEECCHHHEEEEEEEEECC QNNPFDVIFYVKQFDEILVELPPDLQCDNPDELSDEMIKAYTVGKKICWRHHPLMNPVDD CCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PKNYLFEGKAFAEMYVHPVMTGKTRVHFDLKINVKFVLYPAFRIIPEQIIRAMTNAGMSI CHHHEECCHHHHHHHHHHEECCCEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHCCHHE IMQTATNKMFQGISKDFGFTEHA EHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA