| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358433
Identifier: 119358433
GI number: 119358433
Start: 3062609
End: 3063178
Strand: Direct
Name: 119358433
Synonym: Cpha266_2669
Alternate gene names: NA
Gene position: 3062609-3063178 (Clockwise)
Preceding gene: 119358424
Following gene: 119358437
Centisome position: 97.73
GC content: 50.35
Gene sequence:
>570_bases ATGAAAAGGTTATTCTCTCTTGCGGCATGCGTTCATATTATCCTGTTTTTGCTTGTCGCGACGGCCTTTGCGGACGGTTC GAATGCCGCGTTCAACATCGGATATGAAAGCCACCTCAGAGGCGATCTGAAAGGTGCCATCAAGCACTACACTTCGGCTA TCGAGAAGAATCCCGTTTTTGCCATGGCCTATCAGATGCGCGCTGCGGCATGGCAGCAGATGAAACGATATGATCTGGCC ATTAACGACTTTTCGATGGTCATCTCTTTTGGCGAACCCTATTTTCAATCCGTAGGGTACTTTAATCGCGGCGTGGCTAA AAACATGGCCGGCGATTACTATGGCGCCATTCCTGATTTCAACCAGACCATTACGCTCGATAAAAGAATGTCGGCGGCCT ATTTTCATCGGGGTATCGCTAAAAAGAAAACCGGCGATACCTTCGGTCAACTGCAGGACTTTCGCGAAGCCGCCCGTCTT GGAGAGCCCAATGCTGAAAAATGGCTGAACGCCAACTATCCCGGCTGGAAAGAGATGGCGTCTGGCATCACCCCTCTCTT CACCCCTTAA
Upstream 100 bases:
>100_bases AATTGAACTTCATAAGCATGAAATGAATTAGTTTATTGTGCTCATGAAGCTGTAAAAAAGCATACCGGCAGTACTCTATC ATCTTATCGACTGGTCAGCA
Downstream 100 bases:
>100_bases TATCCGAACTGCCGGGTATCGACCCACTCCATGTTGATGATCGACCAGAAATCGAGAGCAAGGCCGTTGAGGACGTATTC GTAGGGAAGCCATCCGTACC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Peptidase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKRLFSLAACVHIILFLLVATAFADGSNAAFNIGYESHLRGDLKGAIKHYTSAIEKNPVFAMAYQMRAAAWQQMKRYDLA INDFSMVISFGEPYFQSVGYFNRGVAKNMAGDYYGAIPDFNQTITLDKRMSAAYFHRGIAKKKTGDTFGQLQDFREAARL GEPNAEKWLNANYPGWKEMASGITPLFTP
Sequences:
>Translated_189_residues MKRLFSLAACVHIILFLLVATAFADGSNAAFNIGYESHLRGDLKGAIKHYTSAIEKNPVFAMAYQMRAAAWQQMKRYDLA INDFSMVISFGEPYFQSVGYFNRGVAKNMAGDYYGAIPDFNQTITLDKRMSAAYFHRGIAKKKTGDTFGQLQDFREAARL GEPNAEKWLNANYPGWKEMASGITPLFTP >Mature_189_residues MKRLFSLAACVHIILFLLVATAFADGSNAAFNIGYESHLRGDLKGAIKHYTSAIEKNPVFAMAYQMRAAAWQQMKRYDLA INDFSMVISFGEPYFQSVGYFNRGVAKNMAGDYYGAIPDFNQTITLDKRMSAAYFHRGIAKKKTGDTFGQLQDFREAARL GEPNAEKWLNANYPGWKEMASGITPLFTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21178; Mature: 21178
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFSLAACVHIILFLLVATAFADGSNAAFNIGYESHLRGDLKGAIKHYTSAIEKNPVF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHH AMAYQMRAAAWQQMKRYDLAINDFSMVISFGEPYFQSVGYFNRGVAKNMAGDYYGAIPDF HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCC NQTITLDKRMSAAYFHRGIAKKKTGDTFGQLQDFREAARLGEPNAEKWLNANYPGWKEMA CCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHH SGITPLFTP CCCCCCCCC >Mature Secondary Structure MKRLFSLAACVHIILFLLVATAFADGSNAAFNIGYESHLRGDLKGAIKHYTSAIEKNPVF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHH AMAYQMRAAAWQQMKRYDLAINDFSMVISFGEPYFQSVGYFNRGVAKNMAGDYYGAIPDF HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCC NQTITLDKRMSAAYFHRGIAKKKTGDTFGQLQDFREAARLGEPNAEKWLNANYPGWKEMA CCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHH SGITPLFTP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA