| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358411
Identifier: 119358411
GI number: 119358411
Start: 3032571
End: 3032945
Strand: Reverse
Name: 119358411
Synonym: Cpha266_2647
Alternate gene names: NA
Gene position: 3032945-3032571 (Counterclockwise)
Preceding gene: 119358412
Following gene: 119358410
Centisome position: 96.78
GC content: 40.8
Gene sequence:
>375_bases ATGAGCAATCGCTATGTACTCGACACGAATGCCGTGATTTACCTGCTGAACGGTCGTCTTGCATTTCAGCTTCCAGAAGG GGAATTCGCCGTTTCAGTTATTTCTAAAATCGAGTTGCTCTCATTTTCTTCGCTATCCGAGAGTGAAGAGCAAAAAATAC ATGAATTGTTGCGAGAACTCGAACAGATACCGTTAAACGATGAAGTAAGCAGAGTGACCATTGAACTACGCAAAAAAAAT AATAAACTAAAACTACCGGACGCAGTGATTGCGGCAACGGCAATCATAAACAATGCGATTCTGTTAACCAACGACCAAAT ATTTTCAGGTATTGAAGAGTTGAGAGTGCAAACACTGGATCTTACTCCCAATTAA
Upstream 100 bases:
>100_bases GTAAAAATTCAAAAAAACTGATGGAATATGCCGGATCGATACCCGCATTAAAAAAAATAGATGGTGTTGCTTATCAGCGT GAACTCAGATCCGAGTGGAA
Downstream 100 bases:
>100_bases CAAGAGCCAATCTTTGTGAATTCGTGTACTGAAGAACGAGGGTAGTGGAAAGTAGGCTGAGGAAAGTGGGTAGTGGAAAG TGGGTACTGGGTAATGGGAA
Product: PilT domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSNRYVLDTNAVIYLLNGRLAFQLPEGEFAVSVISKIELLSFSSLSESEEQKIHELLRELEQIPLNDEVSRVTIELRKKN NKLKLPDAVIAATAIINNAILLTNDQIFSGIEELRVQTLDLTPN
Sequences:
>Translated_124_residues MSNRYVLDTNAVIYLLNGRLAFQLPEGEFAVSVISKIELLSFSSLSESEEQKIHELLRELEQIPLNDEVSRVTIELRKKN NKLKLPDAVIAATAIINNAILLTNDQIFSGIEELRVQTLDLTPN >Mature_123_residues SNRYVLDTNAVIYLLNGRLAFQLPEGEFAVSVISKIELLSFSSLSESEEQKIHELLRELEQIPLNDEVSRVTIELRKKNN KLKLPDAVIAATAIINNAILLTNDQIFSGIEELRVQTLDLTPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13963; Mature: 13832
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRYVLDTNAVIYLLNGRLAFQLPEGEFAVSVISKIELLSFSSLSESEEQKIHELLREL CCCCEEEECCEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EQIPLNDEVSRVTIELRKKNNKLKLPDAVIAATAIINNAILLTNDQIFSGIEELRVQTLD HHCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHHCCEEEEECCHHHHHHHHHCEEEEE LTPN CCCC >Mature Secondary Structure SNRYVLDTNAVIYLLNGRLAFQLPEGEFAVSVISKIELLSFSSLSESEEQKIHELLREL CCCEEEECCEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EQIPLNDEVSRVTIELRKKNNKLKLPDAVIAATAIINNAILLTNDQIFSGIEELRVQTLD HHCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHHCCEEEEECCHHHHHHHHHCEEEEE LTPN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA