Click here to switch to the map view.

The map label for this gene is 119358403

Identifier: 119358403

GI number: 119358403

Start: 3027460

End: 3027813

Strand: Reverse

Name: 119358403

Synonym: Cpha266_2639

Alternate gene names: NA

Gene position: 3027813-3027460 (Counterclockwise)

Preceding gene: 119358404

Following gene: 119358402

Centisome position: 96.61

GC content: 43.22

Gene sequence:

>354_bases
ATGACCTACAAAGACCTCATCGTCTGGCAGAAAGCCGATGCCTTTGCGCATCAAGTTTATCTGAAAACGAGGTCGTTTCC
TAAGGATGAGCTGTTCGGCATAACGTCACAGATCAGAAGGGCAGCCTTGTCAGTGCCGACAAATATTGTTGAAGGCTATG
CGCGGAAAGGGGATAAAGAACTGGCAAGGTTTCTCAATATTGCAATAGGCTCTTTAGCAGAAACCGAATATCTCCTGGGA
TTTGCAAACAGGTTAGGATACATCGATACAACTGATTTTAAGGAGCTTGAGACGCTAAAAGATGACATGTCGAAAGCATT
ATGGACGTTTTACAAAAAAGTGTTATCTGCTTGA

Upstream 100 bases:

>100_bases
AATCTTTTCTTGCCATTAAGCTAATAAGCTAACCCGCCATCAAGCCAATCACTCTTGCTAACAAGCTAACCCGCCATCAA
GCCAACAAGCCTCCCAAAAA

Downstream 100 bases:

>100_bases
TAGCGAGATAGCTGGATTGCCAGTTGGCGGGATAGTGGGAAAGCGAGGCTGCCAAAATCTTTTCTTGCCATTAAGCTAAT
AAGCTAACCCGCCATCAAGC

Product: S23 ribosomal protein

Products: NA

Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; Intervening Sequence

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTYKDLIVWQKADAFAHQVYLKTRSFPKDELFGITSQIRRAALSVPTNIVEGYARKGDKELARFLNIAIGSLAETEYLLG
FANRLGYIDTTDFKELETLKDDMSKALWTFYKKVLSA

Sequences:

>Translated_117_residues
MTYKDLIVWQKADAFAHQVYLKTRSFPKDELFGITSQIRRAALSVPTNIVEGYARKGDKELARFLNIAIGSLAETEYLLG
FANRLGYIDTTDFKELETLKDDMSKALWTFYKKVLSA
>Mature_116_residues
TYKDLIVWQKADAFAHQVYLKTRSFPKDELFGITSQIRRAALSVPTNIVEGYARKGDKELARFLNIAIGSLAETEYLLGF
ANRLGYIDTTDFKELETLKDDMSKALWTFYKKVLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13392; Mature: 13260

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKDLIVWQKADAFAHQVYLKTRSFPKDELFGITSQIRRAALSVPTNIVEGYARKGDKE
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
LARFLNIAIGSLAETEYLLGFANRLGYIDTTDFKELETLKDDMSKALWTFYKKVLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYKDLIVWQKADAFAHQVYLKTRSFPKDELFGITSQIRRAALSVPTNIVEGYARKGDKE
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
LARFLNIAIGSLAETEYLLGFANRLGYIDTTDFKELETLKDDMSKALWTFYKKVLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA