| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358380
Identifier: 119358380
GI number: 119358380
Start: 2998683
End: 3000008
Strand: Direct
Name: 119358380
Synonym: Cpha266_2613
Alternate gene names: NA
Gene position: 2998683-3000008 (Clockwise)
Preceding gene: 119358354
Following gene: 119358381
Centisome position: 95.69
GC content: 49.47
Gene sequence:
>1326_bases TTGACCGGCAGGGCTGGCTTGAGCCTGTTTGCCCTGTATCTGCGCAATATCCAATTTTTTCCGATCGTTGATCGCATGTT TGGCAGCATGCGCAAGAACAGCAAGGGATTGCCGATCACCGAACTGTTCGTTCAAATGCTGAGCTTTTTCATGGATGGAA CGAGTCGTCATCTGGTCTGGTTCGACCAGCTTAAGGCTGATGAGAGTTATTCGGCTGTCCTTGGTTCCGAACGATTGGCT TCATCGCATACCATGAAACGGTTCTTTGGTGCATTTTCCTTTCGGCGAGTCTACCTGTTCAGGAAGTTGTTGCAGGATCT GTTCATCTGGCGGCTGAACCAAACAAAACCCAAGGTTATTGTGCTTGGCCTCGATACGACGGTCTTCGACAACAATGATG CCGAAAAACGTCACGGCGTTGAACCCACGTATAAAAAGGTCAAAGGGTTCCAGCCCCTGCAACTGAATTGGGGCCGTTAT GTGGTAGACGCGGTGTTCCGTGGCGGCAAGAAGCACTCCAATCATGGCGATACGGCCGAAAAGATGCTGCGGCATATGGT AGGGAAAATCCGGACAGCATACCGGGAAGATGTTCCCATCATTGTGCGTATGGACGCAGGGTTTTACGACGACCAGATCT TCAACGTCTGTGAAGAACTGGAGATCGGGTATCTGTGTGGCGGTAAACAATATGCCAACGTAATCGATGAAGCATCAGAG AGCATTGATTGGCAAGCCTACAAGAAAGTAACTGATGAACGGACAAGCTGGATGTATACGGATTTCATGTGCAAACAGAA GACGTGGAAGAAAGAACGGCGGACAATCTTCAGCACACTTTGGGAAGACAACGGGCAGTACTTACTCGACGGGTTATGTC GGGATACGGTGATCATTACCAACATTGGCAAGGGAGAACCAATCGACAAGCAGCTCAGCGCCATCGAAGAAGAGCAGTGG TTCAAAGCCGAAACGATTCTGGCCCGTTATCACGATCGGGGAACGGATGAACTCACTAACCGGGCACTGAAAACCTTTGG TCATGAACAATTGCCCTTCAAACGATTTCCGGCAAACGCAGCATGGTACTATCTGATGCTGCTGGGCAACAACCTCTTTG AATCCTTCAAGGAAGACGTGACAGCATCCGTTATATCGGTGTCGGTCTATGCTCATACCTTTCGTCGACAGTTCATCGAT ACCGCCGCTCAGATCGTTTGTCATTCAGAAAAGGTGCAGATAAAAGTCCCGAGAGCAGCTTATGAGCGGCTCCAATTCGG TAAGCTCTTTGAGATATGCCGGAATCGCTTGCCACAACTCTGTTAG
Upstream 100 bases:
>100_bases TCATGATGCAATATAAACAAATTCCGGAAATAGTCGCCTATTTGATTGCCGGATTAATAAGAAACAGCATATTCAGGAAA TTCTTCCAACAAATGACAAG
Downstream 100 bases:
>100_bases CCAGTTCGATTGAGCATGAACTGAACAAAAAAGACGGGATCAGTGCGTCCAATCGATTGCGCTGTCAGTGGTTATGGTGT ACTATTGTCTGACGGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTGRAGLSLFALYLRNIQFFPIVDRMFGSMRKNSKGLPITELFVQMLSFFMDGTSRHLVWFDQLKADESYSAVLGSERLA SSHTMKRFFGAFSFRRVYLFRKLLQDLFIWRLNQTKPKVIVLGLDTTVFDNNDAEKRHGVEPTYKKVKGFQPLQLNWGRY VVDAVFRGGKKHSNHGDTAEKMLRHMVGKIRTAYREDVPIIVRMDAGFYDDQIFNVCEELEIGYLCGGKQYANVIDEASE SIDWQAYKKVTDERTSWMYTDFMCKQKTWKKERRTIFSTLWEDNGQYLLDGLCRDTVIITNIGKGEPIDKQLSAIEEEQW FKAETILARYHDRGTDELTNRALKTFGHEQLPFKRFPANAAWYYLMLLGNNLFESFKEDVTASVISVSVYAHTFRRQFID TAAQIVCHSEKVQIKVPRAAYERLQFGKLFEICRNRLPQLC
Sequences:
>Translated_441_residues MTGRAGLSLFALYLRNIQFFPIVDRMFGSMRKNSKGLPITELFVQMLSFFMDGTSRHLVWFDQLKADESYSAVLGSERLA SSHTMKRFFGAFSFRRVYLFRKLLQDLFIWRLNQTKPKVIVLGLDTTVFDNNDAEKRHGVEPTYKKVKGFQPLQLNWGRY VVDAVFRGGKKHSNHGDTAEKMLRHMVGKIRTAYREDVPIIVRMDAGFYDDQIFNVCEELEIGYLCGGKQYANVIDEASE SIDWQAYKKVTDERTSWMYTDFMCKQKTWKKERRTIFSTLWEDNGQYLLDGLCRDTVIITNIGKGEPIDKQLSAIEEEQW FKAETILARYHDRGTDELTNRALKTFGHEQLPFKRFPANAAWYYLMLLGNNLFESFKEDVTASVISVSVYAHTFRRQFID TAAQIVCHSEKVQIKVPRAAYERLQFGKLFEICRNRLPQLC >Mature_440_residues TGRAGLSLFALYLRNIQFFPIVDRMFGSMRKNSKGLPITELFVQMLSFFMDGTSRHLVWFDQLKADESYSAVLGSERLAS SHTMKRFFGAFSFRRVYLFRKLLQDLFIWRLNQTKPKVIVLGLDTTVFDNNDAEKRHGVEPTYKKVKGFQPLQLNWGRYV VDAVFRGGKKHSNHGDTAEKMLRHMVGKIRTAYREDVPIIVRMDAGFYDDQIFNVCEELEIGYLCGGKQYANVIDEASES IDWQAYKKVTDERTSWMYTDFMCKQKTWKKERRTIFSTLWEDNGQYLLDGLCRDTVIITNIGKGEPIDKQLSAIEEEQWF KAETILARYHDRGTDELTNRALKTFGHEQLPFKRFPANAAWYYLMLLGNNLFESFKEDVTASVISVSVYAHTFRRQFIDT AAQIVCHSEKVQIKVPRAAYERLQFGKLFEICRNRLPQLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51427; Mature: 51296
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRAGLSLFALYLRNIQFFPIVDRMFGSMRKNSKGLPITELFVQMLSFFMDGTSRHLVW CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEE FDQLKADESYSAVLGSERLASSHTMKRFFGAFSFRRVYLFRKLLQDLFIWRLNQTKPKVI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLGLDTTVFDNNDAEKRHGVEPTYKKVKGFQPLQLNWGRYVVDAVFRGGKKHSNHGDTAE EEECCEEEECCCCCHHHCCCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCCCHHH KMLRHMVGKIRTAYREDVPIIVRMDAGFYDDQIFNVCEELEIGYLCGGKQYANVIDEASE HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH SIDWQAYKKVTDERTSWMYTDFMCKQKTWKKERRTIFSTLWEDNGQYLLDGLCRDTVIIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEE NIGKGEPIDKQLSAIEEEQWFKAETILARYHDRGTDELTNRALKTFGHEQLPFKRFPANA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCH AWYYLMLLGNNLFESFKEDVTASVISVSVYAHTFRRQFIDTAAQIVCHSEKVQIKVPRAA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH YERLQFGKLFEICRNRLPQLC HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGRAGLSLFALYLRNIQFFPIVDRMFGSMRKNSKGLPITELFVQMLSFFMDGTSRHLVW CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEE FDQLKADESYSAVLGSERLASSHTMKRFFGAFSFRRVYLFRKLLQDLFIWRLNQTKPKVI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLGLDTTVFDNNDAEKRHGVEPTYKKVKGFQPLQLNWGRYVVDAVFRGGKKHSNHGDTAE EEECCEEEECCCCCHHHCCCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCCCHHH KMLRHMVGKIRTAYREDVPIIVRMDAGFYDDQIFNVCEELEIGYLCGGKQYANVIDEASE HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH SIDWQAYKKVTDERTSWMYTDFMCKQKTWKKERRTIFSTLWEDNGQYLLDGLCRDTVIIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEE NIGKGEPIDKQLSAIEEEQWFKAETILARYHDRGTDELTNRALKTFGHEQLPFKRFPANA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCH AWYYLMLLGNNLFESFKEDVTASVISVSVYAHTFRRQFIDTAAQIVCHSEKVQIKVPRAA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH YERLQFGKLFEICRNRLPQLC HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA