Click here to switch to the map view.

The map label for this gene is 119358377

Identifier: 119358377

GI number: 119358377

Start: 2995439

End: 2995807

Strand: Reverse

Name: 119358377

Synonym: Cpha266_2609

Alternate gene names: NA

Gene position: 2995807-2995439 (Counterclockwise)

Preceding gene: 119358378

Following gene: 119358376

Centisome position: 95.59

GC content: 40.11

Gene sequence:

>369_bases
ATGAAGGTTGAAAAATTTGAGGATTTGATTGCCTGGCAGAAAGCTCGTGAATTGACAAAAGCTATCTATCACGTAACTGC
CGAAGGTCAATTTTCAAAAGATTTTGGTCTCCGTGACCAGATTCGCAGAGCATCGGTGTCTGTTATGTCGAATATTTCGG
AAGGATTTGAAAGAAGTTCTCTGAATGAATTCCATCAATTTTTGGTAATTGCCAAAGCCTCATGTGCCGAGGTCAGATCA
CAACTCTATGTTGCTCTGGATGCCGGATATATCAATGAAATAACATTTCAGGAATTAAATCAGCAAGCAACCGAAGTATC
AAGAATTACGGGCGGCTTGCGAGTATCAATATCGAAACAAAGATCCTGA

Upstream 100 bases:

>100_bases
TGAGCAATGAGTTCTGAGTCCTGAGTCCTGAGTATTTAAGATAGTACACTTCGCTGTTCTTATTCCGCACTCGGAATTCA
GAACTTACATCCCCGAAAAA

Downstream 100 bases:

>100_bases
GATTCATCAATGAGTACTGAGAACTGAAAAAAGGCCTCAGCTCTCATTGTTGGAATGCTCGGAGTTCAATACTAACCAAA
ACTCTCAGAACGAATAAAAT

Product: S23 ribosomal protein

Products: NA

Alternate protein names: 23S Ribosomal Protein; S23 Ribosomal; 30S Ribosomal Protein S; 23S Ribosomal RNA Protein; Glutamine-Scyllo-Inositol Transaminase

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKVEKFEDLIAWQKARELTKAIYHVTAEGQFSKDFGLRDQIRRASVSVMSNISEGFERSSLNEFHQFLVIAKASCAEVRS
QLYVALDAGYINEITFQELNQQATEVSRITGGLRVSISKQRS

Sequences:

>Translated_122_residues
MKVEKFEDLIAWQKARELTKAIYHVTAEGQFSKDFGLRDQIRRASVSVMSNISEGFERSSLNEFHQFLVIAKASCAEVRS
QLYVALDAGYINEITFQELNQQATEVSRITGGLRVSISKQRS
>Mature_122_residues
MKVEKFEDLIAWQKARELTKAIYHVTAEGQFSKDFGLRDQIRRASVSVMSNISEGFERSSLNEFHQFLVIAKASCAEVRS
QLYVALDAGYINEITFQELNQQATEVSRITGGLRVSISKQRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13848; Mature: 13848

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEKFEDLIAWQKARELTKAIYHVTAEGQFSKDFGLRDQIRRASVSVMSNISEGFERSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNEFHQFLVIAKASCAEVRSQLYVALDAGYINEITFQELNQQATEVSRITGGLRVSISKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
RS
CC
>Mature Secondary Structure
MKVEKFEDLIAWQKARELTKAIYHVTAEGQFSKDFGLRDQIRRASVSVMSNISEGFERSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNEFHQFLVIAKASCAEVRSQLYVALDAGYINEITFQELNQQATEVSRITGGLRVSISKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA