| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358299
Identifier: 119358299
GI number: 119358299
Start: 2901190
End: 2902791
Strand: Direct
Name: 119358299
Synonym: Cpha266_2531
Alternate gene names: NA
Gene position: 2901190-2902791 (Clockwise)
Preceding gene: 119358298
Following gene: 119358306
Centisome position: 92.57
GC content: 52.68
Gene sequence:
>1602_bases ATGGCTACTGTAAAAAGCACCTGGGCAACAAGCCCTATCGTTGCAAACGGAATCCTGTCAGCACCCGAATGGGCTGCAGC AGGAGTAATGCCGATTCCTGCCGGATTTATGATGGTCAAAAATGACAACACGTTTCTCTATGTTGCGCTCGATATGGTCG GTGATTCAGGTGCCGACCCGGGTGTGGGTGATTATTTCTGGTTCAGCATTGACTGTAACGGTAATGGAGCCATCACTCCC GGAGTGGATGTCAACTATAGCATCTATCCCATGCTTCCTGTACGTATCGGGCGTCAGTACTATCTCGGACCGGGCAGATG GACAGGACTGCAAAACACGCCAAGCCCTGCTATCGCAACCAATGGATTCGGACCTTCGCCCCGCTCCCGCACGTCGCACC GTATCTGGGAACTGCGTATCCCCCTTTCTGAAATCGGGATTACAGACCTTGGCTCACACCCTGATCCTGCCGTGCATTTC GGATTGAGAGTAGCATCCCGGAATCCTGTATTCACCTTTGATTTTCCGGCAGGCTTCTATTCGAACTTCTCAAACCTGCA TGCTATTCTGCTGGCAAAAACACCAACGTTCGCTCCCGGTGTTGCCGGGCCGGTGATAGGGTCTGTGGGTCTGATTCCGG CAACGTCACCACAAATCAATGGCGGCTATGCAACAACGGCTCCCTCATATTATCTGCATGTCGATGAAGCCGCATTCGGC GGAACGCTCACCATAATCGGAAACCGTACCACCATGCAAAGCCTTTGGGCCGCAGGAGCACGAAAATACCGTATCCTCCA CCGCGCAGGAAGCAGCGGAGCCTTCACCCCGCTTCTTCAAAGCTGGAATAATTACCGTTGGAACGGGGCAACCAGTACTC TTGAAAGCATCGCCTGGGACAGCCTCCAGATGTATCCGCTGCCGGACCCGACAAAAGATTACTCCATTGATGATCTGCTG ATACAATGGAACACCATCGGTTCAACAGGCATTCACGAACTGAAAGCGGAATTTTTCAGAGACGATCCCGCGCGCACCCC TGTTGCCTCAGCTCCGCAAACACTTCAGCTCATGATTGACAACAATATCCCGTATACAGACATTATCAACGTGCTGCATG ACGGTGCTCCTGTTGCAGCATGTGCAATGGAAACCATGACCAGCGCAACTGACGGAGTGCAGATAACAATTACGGTGACG GATCTCGAAGCCCATCTGAAAGACTTCACACTCAAGGCCCACTGGGGAAACGGAGAATCGACTACCGTTTATTCGGACAA CTATCCTGCACACCGTAATCCGCTGCATCAGTGGAGCGGCGTTACCTCACTGGTTGTGCCCCCTGCTGAATGGGTTCCGC CGCGCACCTGCGCCTACCAGTTCAGACTTTCGGCAACAGCGAGAGTAACCAACGGCTACACGTATATCGGGTATGTGGAA GACGCCTATCATGTAACCCTTATCAAACCGGGTAGCCCCGCTCCAAGAGCAATCAAATTGACCGAAAGTATTCTGCCGTT CGGGCAACTGTCAGGAGAAGCCGCCCCTGAAATCGGTATTGAACCGAAAAAACTGGGAATAGAAACGTTCCCGGTACGGT AG
Upstream 100 bases:
>100_bases ACCATAAGCTCTCGAAAACAAAGCACCGGCAAAAATCTGCAAACCCCTCTGTTTCAATGCAGGAATCCGGTTATCATCAA CCCTGACCAAGGAGAAAACA
Downstream 100 bases:
>100_bases TATGTTCATTGCCGGTCCGGGCCGCCCGACGCTGTGAATCAGACGGGCGGTTCAGACCGGCATGATGATTATCGCTTCTT ATCGAGTTTAATGGTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MATVKSTWATSPIVANGILSAPEWAAAGVMPIPAGFMMVKNDNTFLYVALDMVGDSGADPGVGDYFWFSIDCNGNGAITP GVDVNYSIYPMLPVRIGRQYYLGPGRWTGLQNTPSPAIATNGFGPSPRSRTSHRIWELRIPLSEIGITDLGSHPDPAVHF GLRVASRNPVFTFDFPAGFYSNFSNLHAILLAKTPTFAPGVAGPVIGSVGLIPATSPQINGGYATTAPSYYLHVDEAAFG GTLTIIGNRTTMQSLWAAGARKYRILHRAGSSGAFTPLLQSWNNYRWNGATSTLESIAWDSLQMYPLPDPTKDYSIDDLL IQWNTIGSTGIHELKAEFFRDDPARTPVASAPQTLQLMIDNNIPYTDIINVLHDGAPVAACAMETMTSATDGVQITITVT DLEAHLKDFTLKAHWGNGESTTVYSDNYPAHRNPLHQWSGVTSLVVPPAEWVPPRTCAYQFRLSATARVTNGYTYIGYVE DAYHVTLIKPGSPAPRAIKLTESILPFGQLSGEAAPEIGIEPKKLGIETFPVR
Sequences:
>Translated_533_residues MATVKSTWATSPIVANGILSAPEWAAAGVMPIPAGFMMVKNDNTFLYVALDMVGDSGADPGVGDYFWFSIDCNGNGAITP GVDVNYSIYPMLPVRIGRQYYLGPGRWTGLQNTPSPAIATNGFGPSPRSRTSHRIWELRIPLSEIGITDLGSHPDPAVHF GLRVASRNPVFTFDFPAGFYSNFSNLHAILLAKTPTFAPGVAGPVIGSVGLIPATSPQINGGYATTAPSYYLHVDEAAFG GTLTIIGNRTTMQSLWAAGARKYRILHRAGSSGAFTPLLQSWNNYRWNGATSTLESIAWDSLQMYPLPDPTKDYSIDDLL IQWNTIGSTGIHELKAEFFRDDPARTPVASAPQTLQLMIDNNIPYTDIINVLHDGAPVAACAMETMTSATDGVQITITVT DLEAHLKDFTLKAHWGNGESTTVYSDNYPAHRNPLHQWSGVTSLVVPPAEWVPPRTCAYQFRLSATARVTNGYTYIGYVE DAYHVTLIKPGSPAPRAIKLTESILPFGQLSGEAAPEIGIEPKKLGIETFPVR >Mature_532_residues ATVKSTWATSPIVANGILSAPEWAAAGVMPIPAGFMMVKNDNTFLYVALDMVGDSGADPGVGDYFWFSIDCNGNGAITPG VDVNYSIYPMLPVRIGRQYYLGPGRWTGLQNTPSPAIATNGFGPSPRSRTSHRIWELRIPLSEIGITDLGSHPDPAVHFG LRVASRNPVFTFDFPAGFYSNFSNLHAILLAKTPTFAPGVAGPVIGSVGLIPATSPQINGGYATTAPSYYLHVDEAAFGG TLTIIGNRTTMQSLWAAGARKYRILHRAGSSGAFTPLLQSWNNYRWNGATSTLESIAWDSLQMYPLPDPTKDYSIDDLLI QWNTIGSTGIHELKAEFFRDDPARTPVASAPQTLQLMIDNNIPYTDIINVLHDGAPVAACAMETMTSATDGVQITITVTD LEAHLKDFTLKAHWGNGESTTVYSDNYPAHRNPLHQWSGVTSLVVPPAEWVPPRTCAYQFRLSATARVTNGYTYIGYVED AYHVTLIKPGSPAPRAIKLTESILPFGQLSGEAAPEIGIEPKKLGIETFPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57649; Mature: 57518
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKSTWATSPIVANGILSAPEWAAAGVMPIPAGFMMVKNDNTFLYVALDMVGDSGADP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCEEEEEEEEECCCCCCCC GVGDYFWFSIDCNGNGAITPGVDVNYSIYPMLPVRIGRQYYLGPGRWTGLQNTPSPAIAT CCCCEEEEEEEECCCCEECCCCCCCEEEEEEEEEEECCEEEECCCEECCCCCCCCCCEEE NGFGPSPRSRTSHRIWELRIPLSEIGITDLGSHPDPAVHFGLRVASRNPVFTFDFPAGFY CCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHH SNFSNLHAILLAKTPTFAPGVAGPVIGSVGLIPATSPQINGGYATTAPSYYLHVDEAAFG CCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCC GTLTIIGNRTTMQSLWAAGARKYRILHRAGSSGAFTPLLQSWNNYRWNGATSTLESIAWD CEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHCCC SLQMYPLPDPTKDYSIDDLLIQWNTIGSTGIHELKAEFFRDDPARTPVASAPQTLQLMID CEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC NNIPYTDIINVLHDGAPVAACAMETMTSATDGVQITITVTDLEAHLKDFTLKAHWGNGES CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEECHHHHCEEEEEEEECCCCC TTVYSDNYPAHRNPLHQWSGVTSLVVPPAEWVPPRTCAYQFRLSATARVTNGYTYIGYVE EEEECCCCCCCCCCCHHHCCCEEEEECCHHCCCCCCEEEEEEEEEEEEEECCEEEEEEEC DAYHVTLIKPGSPAPRAIKLTESILPFGQLSGEAAPEIGIEPKKLGIETFPVR CCEEEEEECCCCCCCCEEEEHHHHCCCHHCCCCCCCCCCCCHHHCCCEECCCC >Mature Secondary Structure ATVKSTWATSPIVANGILSAPEWAAAGVMPIPAGFMMVKNDNTFLYVALDMVGDSGADP CCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCEEEEEEEEECCCCCCCC GVGDYFWFSIDCNGNGAITPGVDVNYSIYPMLPVRIGRQYYLGPGRWTGLQNTPSPAIAT CCCCEEEEEEEECCCCEECCCCCCCEEEEEEEEEEECCEEEECCCEECCCCCCCCCCEEE NGFGPSPRSRTSHRIWELRIPLSEIGITDLGSHPDPAVHFGLRVASRNPVFTFDFPAGFY CCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHH SNFSNLHAILLAKTPTFAPGVAGPVIGSVGLIPATSPQINGGYATTAPSYYLHVDEAAFG CCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCC GTLTIIGNRTTMQSLWAAGARKYRILHRAGSSGAFTPLLQSWNNYRWNGATSTLESIAWD CEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHCCC SLQMYPLPDPTKDYSIDDLLIQWNTIGSTGIHELKAEFFRDDPARTPVASAPQTLQLMID CEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC NNIPYTDIINVLHDGAPVAACAMETMTSATDGVQITITVTDLEAHLKDFTLKAHWGNGES CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEECHHHHCEEEEEEEECCCCC TTVYSDNYPAHRNPLHQWSGVTSLVVPPAEWVPPRTCAYQFRLSATARVTNGYTYIGYVE EEEECCCCCCCCCCCHHHCCCEEEEECCHHCCCCCCEEEEEEEEEEEEEECCEEEEEEEC DAYHVTLIKPGSPAPRAIKLTESILPFGQLSGEAAPEIGIEPKKLGIETFPVR CCEEEEEECCCCCCCCEEEEHHHHCCCHHCCCCCCCCCCCCHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA