Click here to switch to the map view.

The map label for this gene is 119358290

Identifier: 119358290

GI number: 119358290

Start: 2886486

End: 2887466

Strand: Reverse

Name: 119358290

Synonym: Cpha266_2522

Alternate gene names: NA

Gene position: 2887466-2886486 (Counterclockwise)

Preceding gene: 119358292

Following gene: 119358289

Centisome position: 92.14

GC content: 49.64

Gene sequence:

>981_bases
ATGGAAATAACTTCCGTGAAAGTGCAGGCTCATCAACTTGCTGTTTATTCAATCCTGCTTCTATGCGTGTACGTTTTACC
GCTCCTTTGTTTGTGTTTCTTTTTTTTTCTGAGCACCTGTCTTTTCTGGCTCTCCGGAACAGCCTGTCTTTCGGGGGCTG
AGGCGGATTCCGTTGTTGTCAAGCCGCTTGTTGCTTCGGAGGCGGAGGTTGAGGTCTGGAACAGGAAAATTCTCGTTCTG
CGTGTTCCTTATCAGGAGTTCAGTCCGGAGGATCGGGCGAAGTTCGCCGTTGAACGGCTGAACCAGATTCCAGCGAATCT
TCCGGTCTACCGCGTTGATGCCGTCGATGTGGTTGAGGGAGGGAATCGGGGTGCCTGGATAAGGGTAAATGGACGCAATA
TTCTTGGCATTATCGAGGGCGATGAAGATCGTGCCGGAGGGGAGAGTTTTGAAACCTATAGACAGCATGCTGTAACATCG
GTTTTCTCCCTGCTTCAGACAAGAAAGATGCAGTTTCATTGGCCGCTGCTTCTTCGTTCTGTCGGTTTTTCTCTTCTGGC
TACACTGTTGTTCGCTCTGGCTGGCTGGGGCGTGCTCAGGCTGTCCTTGCGGGGCATGATATACCTTCGTCGTTTGGGAC
GCGATACGAAGACGCAGGTCGTTTTAGGGGGCGTCAATATCACGCCGTACCTTGTTTCTTTTGTTTCGGGTCTCGTCACG
ATTTTCAAGGCGCTGCTGCTGCTTTCTATCAGTTATATCTGGCTGATATTCGTGCTTTCGCGTTTTCCCTATACCGAACC
GTTTGGTTTACAGCTTTCAGGTTTTTTGTTTCTCTATTTCAGGGCGTTCGGTTCTGCTCTGCTTGCTGCTGTTCCAGGTC
TCTTTACGGTGGCGGTGATCTTGTATATAACGAGGCTTCTCGTGACGGTGATTACGAGGTTTTTTTATGCGGTTGAGGAT
GATTCGATCAAAATCAGGTAG

Upstream 100 bases:

>100_bases
CTGTTTTGAATGAAAAAAATCATCCATTTCATCCCGTTCCCCGTTATCCCGTCTGACAATTCACGCTTGTTCATCTGATC
AGAAAAGGCTGTATATTCTC

Downstream 100 bases:

>100_bases
TTTGAGCCTGAAACGGCAAAAGTAACTCGGCGTATTGCCGTGGTTCTGGTGTGGATTTTCGCCCTCATTATTGCTTATCC
GTTTATTCCCGGCTCACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Mechanosensitive Ion Channel MscS Family

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MEITSVKVQAHQLAVYSILLLCVYVLPLLCLCFFFFLSTCLFWLSGTACLSGAEADSVVVKPLVASEAEVEVWNRKILVL
RVPYQEFSPEDRAKFAVERLNQIPANLPVYRVDAVDVVEGGNRGAWIRVNGRNILGIIEGDEDRAGGESFETYRQHAVTS
VFSLLQTRKMQFHWPLLLRSVGFSLLATLLFALAGWGVLRLSLRGMIYLRRLGRDTKTQVVLGGVNITPYLVSFVSGLVT
IFKALLLLSISYIWLIFVLSRFPYTEPFGLQLSGFLFLYFRAFGSALLAAVPGLFTVAVILYITRLLVTVITRFFYAVED
DSIKIR

Sequences:

>Translated_326_residues
MEITSVKVQAHQLAVYSILLLCVYVLPLLCLCFFFFLSTCLFWLSGTACLSGAEADSVVVKPLVASEAEVEVWNRKILVL
RVPYQEFSPEDRAKFAVERLNQIPANLPVYRVDAVDVVEGGNRGAWIRVNGRNILGIIEGDEDRAGGESFETYRQHAVTS
VFSLLQTRKMQFHWPLLLRSVGFSLLATLLFALAGWGVLRLSLRGMIYLRRLGRDTKTQVVLGGVNITPYLVSFVSGLVT
IFKALLLLSISYIWLIFVLSRFPYTEPFGLQLSGFLFLYFRAFGSALLAAVPGLFTVAVILYITRLLVTVITRFFYAVED
DSIKIR
>Mature_326_residues
MEITSVKVQAHQLAVYSILLLCVYVLPLLCLCFFFFLSTCLFWLSGTACLSGAEADSVVVKPLVASEAEVEVWNRKILVL
RVPYQEFSPEDRAKFAVERLNQIPANLPVYRVDAVDVVEGGNRGAWIRVNGRNILGIIEGDEDRAGGESFETYRQHAVTS
VFSLLQTRKMQFHWPLLLRSVGFSLLATLLFALAGWGVLRLSLRGMIYLRRLGRDTKTQVVLGGVNITPYLVSFVSGLVT
IFKALLLLSISYIWLIFVLSRFPYTEPFGLQLSGFLFLYFRAFGSALLAAVPGLFTVAVILYITRLLVTVITRFFYAVED
DSIKIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36598; Mature: 36598

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITSVKVQAHQLAVYSILLLCVYVLPLLCLCFFFFLSTCLFWLSGTACLSGAEADSVVV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEE
KPLVASEAEVEVWNRKILVLRVPYQEFSPEDRAKFAVERLNQIPANLPVYRVDAVDVVEG
CHHHCCCCHHEECCCEEEEEECCHHHCCCCHHHHHHHHHHHHCCCCCCEEEECHHHEEEC
GNRGAWIRVNGRNILGIIEGDEDRAGGESFETYRQHAVTSVFSLLQTRKMQFHWPLLLRS
CCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGFSLLATLLFALAGWGVLRLSLRGMIYLRRLGRDTKTQVVLGGVNITPYLVSFVSGLVT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
IFKALLLLSISYIWLIFVLSRFPYTEPFGLQLSGFLFLYFRAFGSALLAAVPGLFTVAVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYITRLLVTVITRFFYAVEDDSIKIR
HHHHHHHHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure
MEITSVKVQAHQLAVYSILLLCVYVLPLLCLCFFFFLSTCLFWLSGTACLSGAEADSVVV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEE
KPLVASEAEVEVWNRKILVLRVPYQEFSPEDRAKFAVERLNQIPANLPVYRVDAVDVVEG
CHHHCCCCHHEECCCEEEEEECCHHHCCCCHHHHHHHHHHHHCCCCCCEEEECHHHEEEC
GNRGAWIRVNGRNILGIIEGDEDRAGGESFETYRQHAVTSVFSLLQTRKMQFHWPLLLRS
CCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGFSLLATLLFALAGWGVLRLSLRGMIYLRRLGRDTKTQVVLGGVNITPYLVSFVSGLVT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
IFKALLLLSISYIWLIFVLSRFPYTEPFGLQLSGFLFLYFRAFGSALLAAVPGLFTVAVI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYITRLLVTVITRFFYAVEDDSIKIR
HHHHHHHHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA