| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358216
Identifier: 119358216
GI number: 119358216
Start: 2822158
End: 2822694
Strand: Reverse
Name: 119358216
Synonym: Cpha266_2448
Alternate gene names: NA
Gene position: 2822694-2822158 (Counterclockwise)
Preceding gene: 119358217
Following gene: 119358215
Centisome position: 90.07
GC content: 48.23
Gene sequence:
>537_bases ATGATGAAAATGATGAGGGTTGCGGTCTTTGTTTTTCTTTTTCTGGGAGTGGCGGCAGGCGCCGCCCGTGCCGGTTGGGA TCCGAAGGATGATGAGAAGGCTCAACAGGCTGTTGATTATATCAAAAAGAATGCCCCTGCTCTTGACCGTTTTTTTGTAC ACGCCTATGGCTTTGCAGTTTTTCCTGATATCTACAAAGGCGGCCTTTTTCTGCTTGGAGGAGCGCATGGTCAGGGGTAT GTTTACGAACTCAATACTCTTGTCGGCGAATCGACAGTGACTCAGGTCAATGTTGGGCCGCAGCTTGGCGGACAGTCTTT TTCCGAAATCATTTTCTTTAAAAGCAAGGCTGATCTGGATAACTTCAAAAAGGGTAACTTTGAGTTAACTGCTCAGGCAA CGGCTATTCTGATCAAGAGCGGGATGGCGACCAATACTGATTATTCAAACGGTGTTGCGGTTTTTGCTCTTCCAAAGGCG GGTCTCATGGCTGACCTGACTGTAGGCGGACAGAAGTTCAGCTACAGATCGCGCTGA
Upstream 100 bases:
>100_bases CCGGAGGATTTTTAAGCGGGAAAATTGTACATTACACGTTGGATGATATCGCTTGTTTCTATGGGTTTGATTTTATTGAA CAACTTTAACAGGAACCGTT
Downstream 100 bases:
>100_bases TAATCGGCAGGGTGAAGTGGGTCTTTATCCTGAACGGGTTTATAAACGATATTATTGCAGTATGAAGTATGAATTAGTTG TGGGCCTTGAGGTCCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MMKMMRVAVFVFLFLGVAAGAARAGWDPKDDEKAQQAVDYIKKNAPALDRFFVHAYGFAVFPDIYKGGLFLLGGAHGQGY VYELNTLVGESTVTQVNVGPQLGGQSFSEIIFFKSKADLDNFKKGNFELTAQATAILIKSGMATNTDYSNGVAVFALPKA GLMADLTVGGQKFSYRSR
Sequences:
>Translated_178_residues MMKMMRVAVFVFLFLGVAAGAARAGWDPKDDEKAQQAVDYIKKNAPALDRFFVHAYGFAVFPDIYKGGLFLLGGAHGQGY VYELNTLVGESTVTQVNVGPQLGGQSFSEIIFFKSKADLDNFKKGNFELTAQATAILIKSGMATNTDYSNGVAVFALPKA GLMADLTVGGQKFSYRSR >Mature_178_residues MMKMMRVAVFVFLFLGVAAGAARAGWDPKDDEKAQQAVDYIKKNAPALDRFFVHAYGFAVFPDIYKGGLFLLGGAHGQGY VYELNTLVGESTVTQVNVGPQLGGQSFSEIIFFKSKADLDNFKKGNFELTAQATAILIKSGMATNTDYSNGVAVFALPKA GLMADLTVGGQKFSYRSR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19242; Mature: 19242
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMMRVAVFVFLFLGVAAGAARAGWDPKDDEKAQQAVDYIKKNAPALDRFFVHAYGFAV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FPDIYKGGLFLLGGAHGQGYVYELNTLVGESTVTQVNVGPQLGGQSFSEIIFFKSKADLD CHHHHCCCEEEEECCCCCCEEEEEEHHHCCCCEEEEECCCCCCCCCHHHEEEEECCCCCC NFKKGNFELTAQATAILIKSGMATNTDYSNGVAVFALPKAGLMADLTVGGQKFSYRSR CCCCCCEEEEEHHEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MMKMMRVAVFVFLFLGVAAGAARAGWDPKDDEKAQQAVDYIKKNAPALDRFFVHAYGFAV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FPDIYKGGLFLLGGAHGQGYVYELNTLVGESTVTQVNVGPQLGGQSFSEIIFFKSKADLD CHHHHCCCEEEEECCCCCCEEEEEEHHHCCCCEEEEECCCCCCCCCHHHEEEEECCCCCC NFKKGNFELTAQATAILIKSGMATNTDYSNGVAVFALPKAGLMADLTVGGQKFSYRSR CCCCCCEEEEEHHEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA