Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is rpmC [H]

Identifier: 119358183

GI number: 119358183

Start: 2793893

End: 2794099

Strand: Reverse

Name: rpmC [H]

Synonym: Cpha266_2415

Alternate gene names: 119358183

Gene position: 2794099-2793893 (Counterclockwise)

Preceding gene: 119358184

Following gene: 119358182

Centisome position: 89.16

GC content: 43.96

Gene sequence:

>207_bases
ATGAAAAAATATGAAGTAGCTGCGCTCAGCAAACAGGAGCTTATTGAAAAGATCAACCAGCTTGAGGACAGGCTTGCCGA
TATCAATTTTTATAAAGTGATAGAGCAGCCACAGAATCCCATGGTGTTTCGTAATTCAAGACGGGATGTTGCCCGCATGA
AAACACGCCTGCATCAGCTTGCGTCACTTGAAGCGGTAAAGAACTGA

Upstream 100 bases:

>100_bases
TCAGACTTGCGGCACAAAAACTTCCCATTAAAACAAAGTTTATTGTCCGCCCTGATTACGAGGGATAAGGAGCATCAATT
ACGACAAGGGATCAAGTATC

Downstream 100 bases:

>100_bases
AGAAGGAAAAATCAAAAACCTTTATGTCAATGGATGAAAGTAAAATAATCAGTGCCGCCGGTGGACAGGAATCTCAATCG
AGAGGCAGGAAAAAAAGCTG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKKYEVAALSKQELIEKINQLEDRLADINFYKVIEQPQNPMVFRNSRRDVARMKTRLHQLASLEAVKN

Sequences:

>Translated_68_residues
MKKYEVAALSKQELIEKINQLEDRLADINFYKVIEQPQNPMVFRNSRRDVARMKTRLHQLASLEAVKN
>Mature_68_residues
MKKYEVAALSKQELIEKINQLEDRLADINFYKVIEQPQNPMVFRNSRRDVARMKTRLHQLASLEAVKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 8059; Mature: 8059

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYEVAALSKQELIEKINQLEDRLADINFYKVIEQPQNPMVFRNSRRDVARMKTRLHQL
CCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH
ASLEAVKN
HHHHHHCC
>Mature Secondary Structure
MKKYEVAALSKQELIEKINQLEDRLADINFYKVIEQPQNPMVFRNSRRDVARMKTRLHQL
CCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHH
ASLEAVKN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA