| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is chlL [H]
Identifier: 119358154
GI number: 119358154
Start: 2773622
End: 2774449
Strand: Reverse
Name: chlL [H]
Synonym: Cpha266_2386
Alternate gene names: 119358154
Gene position: 2774449-2773622 (Counterclockwise)
Preceding gene: 119358155
Following gene: 119358152
Centisome position: 88.53
GC content: 50.85
Gene sequence:
>828_bases ATGAGTTTAGTCTTAGCGGTATATGGCAAGGGCGGTATAGGAAAAAGCACCACCAGCGCCAATATTTCGGCGGCCCTCGC CCTGAAAGGTGCCAAGGTTCTTCAGATCGGCTGCGACCCCAAGCATGACAGTACGTTTCCTATTACAGGGAAGCTGCAGA AAACCGTTATCGAAGCTCTTGAAGAGGTTGATTTTCATCACGAAGAGCTTGGAGCCGAAGATATTATCGAAACCGGTTTT GCCGGCATAGACTGTCTTGAGGCAGGCGGCCCTCCGGCAGGAAGCGGATGCGGCGGCTATGTTGTAGGCGAATCCGTTAC CCTGCTCCAGGAACTCGGACTGTATGATAAATACGACGTAATTCTTTTCGACGTGCTCGGTGATGTGGTTTGTGGCGGAT TCAGCGCTCCCCTCAACTATGCCGACTATGCCATCATCATTGCCACCAACGATTTCGACAGCATTTTTGCAGCTAATCGC CTCTGTATGGCTATTCAGCAGAAAAGCGTACGTTACAAGGTCAAACTTGCCGGTATCGTTGCCAACAGGGTTGATTATAC CACTGGCGGCGGAACCAACATGCTCGACCAGTTTGCCGAAAAAGTCGGAACCAGGCTGCTTGCCAAAGTGCCTTACCATG AACTGATCCGTAAAAGCCGCTTTGCCGGCAAAACCCTCTTTGCCATGGAGGATACGCCGGGTAAGGACGATTGCCTCATT CCCTACAACGAAATTGCCGATTTTCTCATTCAGGAAAATCCTCTCGCTTCGGTACCTGTTCCGATCGGTGACCGTGAAAT ATTCGACATGGTTGGTGGATGGCAGTAA
Upstream 100 bases:
>100_bases ATTGGCGAATCATGTGTCACCGCTGAGGTTTTCCGAAAAGCAAAAGAGTCTCTGGGCGGATAAGGAATTTCTATTAATAA TTTTTTTTTCTGATATCATT
Downstream 100 bases:
>100_bases GATCGATTATCAGATATTCTATCAAAAAAGGCGGCCTTGGTGTCGCCTTTTTTGATGTTCCGATTCGTTCTTATGACGTT CAGTTACGTTACCAGCCTGA
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELGAEDIIETGF AGIDCLEAGGPPAGSGCGGYVVGESVTLLQELGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAIIIATNDFDSIFAANR LCMAIQQKSVRYKVKLAGIVANRVDYTTGGGTNMLDQFAEKVGTRLLAKVPYHELIRKSRFAGKTLFAMEDTPGKDDCLI PYNEIADFLIQENPLASVPVPIGDREIFDMVGGWQ
Sequences:
>Translated_275_residues MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELGAEDIIETGF AGIDCLEAGGPPAGSGCGGYVVGESVTLLQELGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAIIIATNDFDSIFAANR LCMAIQQKSVRYKVKLAGIVANRVDYTTGGGTNMLDQFAEKVGTRLLAKVPYHELIRKSRFAGKTLFAMEDTPGKDDCLI PYNEIADFLIQENPLASVPVPIGDREIFDMVGGWQ >Mature_274_residues SLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELGAEDIIETGFA GIDCLEAGGPPAGSGCGGYVVGESVTLLQELGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAIIIATNDFDSIFAANRL CMAIQQKSVRYKVKLAGIVANRVDYTTGGGTNMLDQFAEKVGTRLLAKVPYHELIRKSRFAGKTLFAMEDTPGKDDCLIP YNEIADFLIQENPLASVPVPIGDREIFDMVGGWQ
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000392 - InterPro: IPR005971 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: 1.18.-.-
Molecular weight: Translated: 29421; Mature: 29290
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEAL CEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EEVDFHHEELGAEDIIETGFAGIDCLEAGGPPAGSGCGGYVVGESVTLLQELGLYDKYDV HHHCHHHHHCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHH ILFDVLGDVVCGGFSAPLNYADYAIIIATNDFDSIFAANRLCMAIQQKSVRYKVKLAGIV HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEEEEEE ANRVDYTTGGGTNMLDQFAEKVGTRLLAKVPYHELIRKSRFAGKTLFAMEDTPGKDDCLI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCC PYNEIADFLIQENPLASVPVPIGDREIFDMVGGWQ CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEAL EEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EEVDFHHEELGAEDIIETGFAGIDCLEAGGPPAGSGCGGYVVGESVTLLQELGLYDKYDV HHHCHHHHHCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHH ILFDVLGDVVCGGFSAPLNYADYAIIIATNDFDSIFAANRLCMAIQQKSVRYKVKLAGIV HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEEEEEE ANRVDYTTGGGTNMLDQFAEKVGTRLLAKVPYHELIRKSRFAGKTLFAMEDTPGKDDCLI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCC PYNEIADFLIQENPLASVPVPIGDREIFDMVGGWQ CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA