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The map label for this gene is yibD [C]

Identifier: 119358102

GI number: 119358102

Start: 2692766

End: 2694241

Strand: Reverse

Name: yibD [C]

Synonym: Cpha266_2332

Alternate gene names: 119358102

Gene position: 2694241-2692766 (Counterclockwise)

Preceding gene: 119358103

Following gene: 119358101

Centisome position: 85.97

GC content: 51.63

Gene sequence:

>1476_bases
ATGATTTTTCCGCTCTCCTTTTACCGTTATTATCGAAAAAACAGATTTGCAGAGGCTCTTGCCTGTTTGAATAACGGTAA
AGCTGTTCGGTATTCCGAAGAGCTTTGGGCTTGCTATCGACTTGGTTTATATGCTACTGTCGCGGAAAGCAGACGTGCCG
ACAATCGATGGAAAGGCATGTTTGCCTCTTCGATTTCGTTGGCGGCATGCGGTTTTTGTCGGGAGTCAGCCTCTCTTGCC
CGCAGTTTGCATAAAAAACGCGGGTATGGCAGAATTCGTATCATGCATGCCGATGCTCTTGCGCCTTTTCAACCGGCTCT
CTCGCTTGAGCTGATCGAAGGCCTCGATGCGCCTGCCGGGTTGATGGCTGCGTTGCTGATGGGGAACGGACGTATGGACG
AAAGCAGGTATATGCTTGAGAAAGCGATTGAAAGGGGGGAGGCCAGGCAAAATCCCGAGCTGTATCTGTTTTTAAGTAAT
GCAGAGCAAGGCGACCCCGGAAAAAAACTTGTTCGTTTGAACGCTTATCTCGAAGCGGCGTCGTTGCCTCCGGTGAGACT
TTGTGATTCGCTTGAATCACCCTCCCCTATGAACCTTCAGCCTGCAGTTGAGCTTCCCGGCATAGATGGGCCGCTTGTAA
GCGTGCTGATGACGGCTTATCAGAGCGGTCAGTACATCGATACAGCAATACGATCGATTATGCAGCAGACCTGGCGAAAC
ATCGAACTGATCGTTATTGACGATGCAAGCTCCGATACGACTGCGGATATCGTGCGTTCCTGGTGTGCGATAGATAATCG
TATTCGGTCTATCCGGCTGCCTTGCAATGTCGGCACTTTTATAGCTAAAAATATCGGGTTGCGCTTTGCGTCCGGAGATT
TTGTGACATGTCATGATTCTGACGACTGGTCGCATCCCCTGAAGATCGAACGTCAGGTCGTTCCCCTTCTGAGAGATCGA
TCTCTTGTTGGCACGATTTCCGATTGGGTGCGTATGCAGGAGGATGGTATTTTTTATGCGCGTTCGGTCCATCCTCTTCG
GCGCCTGAATCCATCTTCGCTTATGTTCCACCGTAATGCGGTGCTCTCCGTGGCGGGTTCATGGGATTGTGTGCGTACCG
GAGCTGATAGCGAGTTTATCGCGCGCCTGAAGCTTGTTTTCGGACGGAAAGCCGTGCTGCGCATCAAACAGCCGCTTTCC
TTTGGCGCTCATCGACCCGATTCGCTGATGACCTCTCCTGAAACCGGATATGGTTCTTGCGGTATGTCGCCTTCGCGTCT
GGCGTATTGGGAGGCATGGAGCTTCTGGCATATCGATTCTTTGCGTAGAGGATGCGGGCCGAAGATGCCTTCGGATATGC
CTCGACCAAGGCCGTTTGCCGTCGATGATTTTCATCTTGTTCCCGACAGCGATGTTCAGCACTGCCTGGATTGCTTGCAT
GAAGCAAGATGTGGCGTTGCAGTTCCCTCGTTCTAA

Upstream 100 bases:

>100_bases
ACCGCTCATGACATTGTTCTGATTTGCCCATTTAATTACAGGCATGAACCCGCTATTCCCTGGTAACCGTTACGAAGCTT
AATTCTGATATGCGCTTTTT

Downstream 100 bases:

>100_bases
TTCCAATTCTGTTTCAATGATGCGTTTATAATCCAGGGCCAGGCGATGAGGGAGTGGTGAGAGGTTTGCCCACGATTTTC
CACGGATTTACACGAATTGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MIFPLSFYRYYRKNRFAEALACLNNGKAVRYSEELWACYRLGLYATVAESRRADNRWKGMFASSISLAACGFCRESASLA
RSLHKKRGYGRIRIMHADALAPFQPALSLELIEGLDAPAGLMAALLMGNGRMDESRYMLEKAIERGEARQNPELYLFLSN
AEQGDPGKKLVRLNAYLEAASLPPVRLCDSLESPSPMNLQPAVELPGIDGPLVSVLMTAYQSGQYIDTAIRSIMQQTWRN
IELIVIDDASSDTTADIVRSWCAIDNRIRSIRLPCNVGTFIAKNIGLRFASGDFVTCHDSDDWSHPLKIERQVVPLLRDR
SLVGTISDWVRMQEDGIFYARSVHPLRRLNPSSLMFHRNAVLSVAGSWDCVRTGADSEFIARLKLVFGRKAVLRIKQPLS
FGAHRPDSLMTSPETGYGSCGMSPSRLAYWEAWSFWHIDSLRRGCGPKMPSDMPRPRPFAVDDFHLVPDSDVQHCLDCLH
EARCGVAVPSF

Sequences:

>Translated_491_residues
MIFPLSFYRYYRKNRFAEALACLNNGKAVRYSEELWACYRLGLYATVAESRRADNRWKGMFASSISLAACGFCRESASLA
RSLHKKRGYGRIRIMHADALAPFQPALSLELIEGLDAPAGLMAALLMGNGRMDESRYMLEKAIERGEARQNPELYLFLSN
AEQGDPGKKLVRLNAYLEAASLPPVRLCDSLESPSPMNLQPAVELPGIDGPLVSVLMTAYQSGQYIDTAIRSIMQQTWRN
IELIVIDDASSDTTADIVRSWCAIDNRIRSIRLPCNVGTFIAKNIGLRFASGDFVTCHDSDDWSHPLKIERQVVPLLRDR
SLVGTISDWVRMQEDGIFYARSVHPLRRLNPSSLMFHRNAVLSVAGSWDCVRTGADSEFIARLKLVFGRKAVLRIKQPLS
FGAHRPDSLMTSPETGYGSCGMSPSRLAYWEAWSFWHIDSLRRGCGPKMPSDMPRPRPFAVDDFHLVPDSDVQHCLDCLH
EARCGVAVPSF
>Mature_491_residues
MIFPLSFYRYYRKNRFAEALACLNNGKAVRYSEELWACYRLGLYATVAESRRADNRWKGMFASSISLAACGFCRESASLA
RSLHKKRGYGRIRIMHADALAPFQPALSLELIEGLDAPAGLMAALLMGNGRMDESRYMLEKAIERGEARQNPELYLFLSN
AEQGDPGKKLVRLNAYLEAASLPPVRLCDSLESPSPMNLQPAVELPGIDGPLVSVLMTAYQSGQYIDTAIRSIMQQTWRN
IELIVIDDASSDTTADIVRSWCAIDNRIRSIRLPCNVGTFIAKNIGLRFASGDFVTCHDSDDWSHPLKIERQVVPLLRDR
SLVGTISDWVRMQEDGIFYARSVHPLRRLNPSSLMFHRNAVLSVAGSWDCVRTGADSEFIARLKLVFGRKAVLRIKQPLS
FGAHRPDSLMTSPETGYGSCGMSPSRLAYWEAWSFWHIDSLRRGCGPKMPSDMPRPRPFAVDDFHLVPDSDVQHCLDCLH
EARCGVAVPSF

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 55019; Mature: 55019

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPLSFYRYYRKNRFAEALACLNNGKAVRYSEELWACYRLGLYATVAESRRADNRWKGM
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FASSISLAACGFCRESASLARSLHKKRGYGRIRIMHADALAPFQPALSLELIEGLDAPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHH
LMAALLMGNGRMDESRYMLEKAIERGEARQNPELYLFLSNAEQGDPGKKLVRLNAYLEAA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHEEEEEHHHHHC
SLPPVRLCDSLESPSPMNLQPAVELPGIDGPLVSVLMTAYQSGQYIDTAIRSIMQQTWRN
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
IELIVIDDASSDTTADIVRSWCAIDNRIRSIRLPCNVGTFIAKNIGLRFASGDFVTCHDS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCEEECCCEEEEECC
DDWSHPLKIERQVVPLLRDRSLVGTISDWVRMQEDGIFYARSVHPLRRLNPSSLMFHRNA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHEEECCE
VLSVAGSWDCVRTGADSEFIARLKLVFGRKAVLRIKQPLSFGAHRPDSLMTSPETGYGSC
EEEECCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC
GMSPSRLAYWEAWSFWHIDSLRRGCGPKMPSDMPRPRPFAVDDFHLVPDSDVQHCLDCLH
CCCCCCEEEECCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH
EARCGVAVPSF
HHHCCCCCCCC
>Mature Secondary Structure
MIFPLSFYRYYRKNRFAEALACLNNGKAVRYSEELWACYRLGLYATVAESRRADNRWKGM
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FASSISLAACGFCRESASLARSLHKKRGYGRIRIMHADALAPFQPALSLELIEGLDAPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHH
LMAALLMGNGRMDESRYMLEKAIERGEARQNPELYLFLSNAEQGDPGKKLVRLNAYLEAA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHEEEEEHHHHHC
SLPPVRLCDSLESPSPMNLQPAVELPGIDGPLVSVLMTAYQSGQYIDTAIRSIMQQTWRN
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
IELIVIDDASSDTTADIVRSWCAIDNRIRSIRLPCNVGTFIAKNIGLRFASGDFVTCHDS
EEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCEEECCCEEEEECC
DDWSHPLKIERQVVPLLRDRSLVGTISDWVRMQEDGIFYARSVHPLRRLNPSSLMFHRNA
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHEEECCE
VLSVAGSWDCVRTGADSEFIARLKLVFGRKAVLRIKQPLSFGAHRPDSLMTSPETGYGSC
EEEECCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC
GMSPSRLAYWEAWSFWHIDSLRRGCGPKMPSDMPRPRPFAVDDFHLVPDSDVQHCLDCLH
CCCCCCEEEECCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHH
EARCGVAVPSF
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]