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The map label for this gene is ybjS [C]

Identifier: 119358077

GI number: 119358077

Start: 2638509

End: 2639504

Strand: Reverse

Name: ybjS [C]

Synonym: Cpha266_2305

Alternate gene names: 119358077

Gene position: 2639504-2638509 (Counterclockwise)

Preceding gene: 119358079

Following gene: 119358073

Centisome position: 84.22

GC content: 54.52

Gene sequence:

>996_bases
ATGGGTGAACGGATATTGGTGACCGGCGCAACCGGTTTTATCGGAAAAAGGCTTGTGGAATATCTTCTTGTCAGAGGATT
TCGCGTAAGGATTTTTCTTCGTCCTGAAAGCGCAAGGGAGAGCGGTTTTGGCGGTAGAGTCGAGGAGTTTCGAGGTAGTT
ACACCGACAGCGAGGCGATTGGGCGTGCTGTACGGGATATGGACAGGGTGGTGCATCTCGCAGGGGTTACCAAGGCGGCT
GATGAAAAGGAGTTTTGGGAAGGGAATGTTGTTCCTGTAATCCGGTTGCTGGCTGCGCTTGGCGAGTATAATCCGGGTAT
GAAGCGCCTGCTTCTCGTATCTTCCCTTGCCGCCTGCGGCCCTTCCTGTGAAGGCGTTACAGGAATTCGCGAGGAGGACG
CAGCGCATCCGGTGAGCGCTTACGGAAGAAGCAAGCTTGAGGCTGAAATCCTTTGCATGGAAGCTTCACGGGATATTCCT
GTAACGATTGTTCGGCCACCGGCGGTTTACGGGCCGGGCGATCGTGATATTCTGCAGGTTTTTCAGATGATGCAGCGAGG
AGTACTCCTGACGGCGGGCAACGCCCGACGACAGCGGTTCAGTATGGTCTATGTGGACGATCTTGTTCAAGGAATTGTTG
CGGCGGCCTCTGCTGATGCTTCGTGCGGGAAAAGGTACTTTATCACCTCCCCGGAAGCCTGTTCGTGGGACAGTCTCATT
CTGGCGGCAAAGCCCGTGCTCGGCTTCAGGCGTCTCTTCAGGGTTGCCCTGCCCGGACCGCTGGTTTATATTCTTGGTTC
CGTGCTCGAAATAGCTGGCACGCTTGCGGGAAAAGCCGCGCTGATCAATCGCGACAAGGCAAACGAACTGCTTCAGGATT
TCTGGGTCTGTTCACCCGAAAAAGCAGCCGAGGAACTTGGCTTTACTGCCCGAACTTCGCTTGCTGAAGGGATTGAAAAG
ACTATAGCATGGTACAGGCAGAAAGGGTGGATGTGA

Upstream 100 bases:

>100_bases
TTTATAAAAGGGGGTTATTGTTTTTTTAACGTTAATGTTAAAAACGGGTTAGCTGATGCTTTACGCGGAGGTTTTGTGAC
CCGTGAAAAGGCTTTGATCT

Downstream 100 bases:

>100_bases
AAAAACAGGTGCTATGAGGGACGTGTTACGTGTTAAGCCGGGTACGGGGGAAAATGTTCTCATCCCGATATCAGCGCGGG
CATCCCCCCATTGTCATACT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGERILVTGATGFIGKRLVEYLLVRGFRVRIFLRPESARESGFGGRVEEFRGSYTDSEAIGRAVRDMDRVVHLAGVTKAA
DEKEFWEGNVVPVIRLLAALGEYNPGMKRLLLVSSLAACGPSCEGVTGIREEDAAHPVSAYGRSKLEAEILCMEASRDIP
VTIVRPPAVYGPGDRDILQVFQMMQRGVLLTAGNARRQRFSMVYVDDLVQGIVAAASADASCGKRYFITSPEACSWDSLI
LAAKPVLGFRRLFRVALPGPLVYILGSVLEIAGTLAGKAALINRDKANELLQDFWVCSPEKAAEELGFTARTSLAEGIEK
TIAWYRQKGWM

Sequences:

>Translated_331_residues
MGERILVTGATGFIGKRLVEYLLVRGFRVRIFLRPESARESGFGGRVEEFRGSYTDSEAIGRAVRDMDRVVHLAGVTKAA
DEKEFWEGNVVPVIRLLAALGEYNPGMKRLLLVSSLAACGPSCEGVTGIREEDAAHPVSAYGRSKLEAEILCMEASRDIP
VTIVRPPAVYGPGDRDILQVFQMMQRGVLLTAGNARRQRFSMVYVDDLVQGIVAAASADASCGKRYFITSPEACSWDSLI
LAAKPVLGFRRLFRVALPGPLVYILGSVLEIAGTLAGKAALINRDKANELLQDFWVCSPEKAAEELGFTARTSLAEGIEK
TIAWYRQKGWM
>Mature_330_residues
GERILVTGATGFIGKRLVEYLLVRGFRVRIFLRPESARESGFGGRVEEFRGSYTDSEAIGRAVRDMDRVVHLAGVTKAAD
EKEFWEGNVVPVIRLLAALGEYNPGMKRLLLVSSLAACGPSCEGVTGIREEDAAHPVSAYGRSKLEAEILCMEASRDIPV
TIVRPPAVYGPGDRDILQVFQMMQRGVLLTAGNARRQRFSMVYVDDLVQGIVAAASADASCGKRYFITSPEACSWDSLIL
AAKPVLGFRRLFRVALPGPLVYILGSVLEIAGTLAGKAALINRDKANELLQDFWVCSPEKAAEELGFTARTSLAEGIEKT
IAWYRQKGWM

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=349, Percent_Identity=21.7765042979943, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI8393516, Length=349, Percent_Identity=21.7765042979943, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87081792, Length=349, Percent_Identity=25.214899713467, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36204; Mature: 36073

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERILVTGATGFIGKRLVEYLLVRGFRVRIFLRPESARESGFGGRVEEFRGSYTDSEAI
CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCCHHHH
GRAVRDMDRVVHLAGVTKAADEKEFWEGNVVPVIRLLAALGEYNPGMKRLLLVSSLAACG
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PSCEGVTGIREEDAAHPVSAYGRSKLEAEILCMEASRDIPVTIVRPPAVYGPGDRDILQV
CCCCCCCCCCHHCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH
FQMMQRGVLLTAGNARRQRFSMVYVDDLVQGIVAAASADASCGKRYFITSPEACSWDSLI
HHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
LAAKPVLGFRRLFRVALPGPLVYILGSVLEIAGTLAGKAALINRDKANELLQDFWVCSPE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCHH
KAAEELGFTARTSLAEGIEKTIAWYRQKGWM
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GERILVTGATGFIGKRLVEYLLVRGFRVRIFLRPESARESGFGGRVEEFRGSYTDSEAI
CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCCHHHH
GRAVRDMDRVVHLAGVTKAADEKEFWEGNVVPVIRLLAALGEYNPGMKRLLLVSSLAACG
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PSCEGVTGIREEDAAHPVSAYGRSKLEAEILCMEASRDIPVTIVRPPAVYGPGDRDILQV
CCCCCCCCCCHHCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHH
FQMMQRGVLLTAGNARRQRFSMVYVDDLVQGIVAAASADASCGKRYFITSPEACSWDSLI
HHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
LAAKPVLGFRRLFRVALPGPLVYILGSVLEIAGTLAGKAALINRDKANELLQDFWVCSPE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCCHH
KAAEELGFTARTSLAEGIEKTIAWYRQKGWM
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]