Click here to switch to the map view.

The map label for this gene is csmC [H]

Identifier: 119358072

GI number: 119358072

Start: 2633406

End: 2633825

Strand: Reverse

Name: csmC [H]

Synonym: Cpha266_2300

Alternate gene names: 119358072

Gene position: 2633825-2633406 (Counterclockwise)

Preceding gene: 119358073

Following gene: 119358071

Centisome position: 84.04

GC content: 48.33

Gene sequence:

>420_bases
ATGTCAGAATCGTATCAGAAACTTCGCAAGGATTTTAAGGAACTCGATTTTACCGATCGCCTCACTTTTCTTGCGGAGAG
CGTTCTTATGACCGGTCAGGGAGCAGTTGTCGGAGGACTTGAGCTTGCAGGCAGTGTTGTTGAAACAGTTGCGGGTACTG
TTGGCTCGTTGATCGATGCAACAGGTATTGGTGCCATGCTTGGGCGTACCGGAGGAGTTGTTGGTGAAACAATCGACAGA
GTAGCCATTACGGTGAAAGATGTCTCCCGTTCTGCAGGCGAACTGTACAGCGATGCAGTCAAAAACGTTGATAACGTTAC
CGATAACGCTGCCAGGGCTATTGGTGATGCAGGAGTCAGCGCTTCAGAAGCTGTCAGGAACATTGCCGGCTCTTTTCAGA
AAACAACGGTAAAAAAATAA

Upstream 100 bases:

>100_bases
TAGGGGTGTTTTTTTATTAATTTTGTTCAAGGTTTAAACTTTGGAAAAATAAAAACAATGGGGGTGCGCATTATGCCGCC
TCAATCAACTGGAGATAATC

Downstream 100 bases:

>100_bases
TTGACCCGCGATGAACGGGTTATTTGTTCGTTCTTTATTTGTGTTTTTTTGTTTATTGCTTTATATTAGGTTAAAGTTCT
ATTCGCAATTCAGGGTACTT

Product: chlorosome envelope protein C

Products: NA

Alternate protein names: 14 kDa chlorosome protein [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSESYQKLRKDFKELDFTDRLTFLAESVLMTGQGAVVGGLELAGSVVETVAGTVGSLIDATGIGAMLGRTGGVVGETIDR
VAITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVSASEAVRNIAGSFQKTTVKK

Sequences:

>Translated_139_residues
MSESYQKLRKDFKELDFTDRLTFLAESVLMTGQGAVVGGLELAGSVVETVAGTVGSLIDATGIGAMLGRTGGVVGETIDR
VAITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVSASEAVRNIAGSFQKTTVKK
>Mature_138_residues
SESYQKLRKDFKELDFTDRLTFLAESVLMTGQGAVVGGLELAGSVVETVAGTVGSLIDATGIGAMLGRTGGVVGETIDRV
AITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVSASEAVRNIAGSFQKTTVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020995 [H]

Pfam domain/function: PF11098 Chlorosome_CsmC [H]

EC number: NA

Molecular weight: Translated: 14343; Mature: 14212

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESYQKLRKDFKELDFTDRLTFLAESVLMTGQGAVVGGLELAGSVVETVAGTVGSLIDA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGIGAMLGRTGGVVGETIDRVAITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASEAVRNIAGSFQKTTVKK
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESYQKLRKDFKELDFTDRLTFLAESVLMTGQGAVVGGLELAGSVVETVAGTVGSLIDA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGIGAMLGRTGGVVGETIDRVAITVKDVSRSAGELYSDAVKNVDNVTDNAARAIGDAGVS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASEAVRNIAGSFQKTTVKK
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA