| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358054
Identifier: 119358054
GI number: 119358054
Start: 2614677
End: 2615252
Strand: Direct
Name: 119358054
Synonym: Cpha266_2282
Alternate gene names: NA
Gene position: 2614677-2615252 (Clockwise)
Preceding gene: 119358053
Following gene: 119358055
Centisome position: 83.43
GC content: 47.57
Gene sequence:
>576_bases ATGAAAAACGCGAAAGAAGGCGCATCGAAAATCTGGATCGCGGTACTGGTAATCGGCCTCATTATTGCCGCTGTTTCAGC ACTATCCTTTATGGCAACAAAGGTCGAAAAGGGTGATCGATATGGTGGCGGCATCGTTTTCTATATTTTGCAACCGGGAG ATGCCGGCTATGAAGCATGGAAACAGCATGGACTTATCAGCGCTCTGAACGATCAATCCAGCGGAACTGAATGGAGCAAT ATTAAAGATGTTCCCGTTTTCAGAACGCAAACAGCGATAGGGACGGGACGTCAGAACACGGAATTTATCACGGCTCAAGC CGGACATATTTCGAGCGCAGCGAAAATCTGTGCCGATTACGTTCATGAAGGCCATAGCGACTGGTATCTGCCAAGCAGGG ACGAACTGAACATACTATGCAAAAGTAATGTTCTCGATTGCGGTAATTATGAAGACGCACACTGGAGTTCATCAGAGGCG ACGCCAAACGACGCATGGGCTCAGCTTGAAGGAAGCGCGCCCCATTACCAGATGAAACAAATCGGGATAAAAGTCAGAGC AATACGTTCGTTTTAA
Upstream 100 bases:
>100_bases AGACAAGCCATTGTCTGAAAACATTCGATAAAACAGTTGCGTGTACACTGTATTGATGGGGTTAATAATCTGAAAACTCT TCAACCAAAATACACTCGAG
Downstream 100 bases:
>100_bases CATCTTGAGCTTGACATTCTGTCCGTCACGTGCCGTTACCTGTAAGGTATCGGCATGTTTTTTTTCTTCTCCGAAGGCCT GACGTTATAACGGGATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKNAKEGASKIWIAVLVIGLIIAAVSALSFMATKVEKGDRYGGGIVFYILQPGDAGYEAWKQHGLISALNDQSSGTEWSN IKDVPVFRTQTAIGTGRQNTEFITAQAGHISSAAKICADYVHEGHSDWYLPSRDELNILCKSNVLDCGNYEDAHWSSSEA TPNDAWAQLEGSAPHYQMKQIGIKVRAIRSF
Sequences:
>Translated_191_residues MKNAKEGASKIWIAVLVIGLIIAAVSALSFMATKVEKGDRYGGGIVFYILQPGDAGYEAWKQHGLISALNDQSSGTEWSN IKDVPVFRTQTAIGTGRQNTEFITAQAGHISSAAKICADYVHEGHSDWYLPSRDELNILCKSNVLDCGNYEDAHWSSSEA TPNDAWAQLEGSAPHYQMKQIGIKVRAIRSF >Mature_191_residues MKNAKEGASKIWIAVLVIGLIIAAVSALSFMATKVEKGDRYGGGIVFYILQPGDAGYEAWKQHGLISALNDQSSGTEWSN IKDVPVFRTQTAIGTGRQNTEFITAQAGHISSAAKICADYVHEGHSDWYLPSRDELNILCKSNVLDCGNYEDAHWSSSEA TPNDAWAQLEGSAPHYQMKQIGIKVRAIRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20863; Mature: 20863
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAKEGASKIWIAVLVIGLIIAAVSALSFMATKVEKGDRYGGGIVFYILQPGDAGYEAW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHH KQHGLISALNDQSSGTEWSNIKDVPVFRTQTAIGTGRQNTEFITAQAGHISSAAKICADY HHCCCEEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH VHEGHSDWYLPSRDELNILCKSNVLDCGNYEDAHWSSSEATPNDAWAQLEGSAPHYQMKQ HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHH IGIKVRAIRSF HCEEEEEEECC >Mature Secondary Structure MKNAKEGASKIWIAVLVIGLIIAAVSALSFMATKVEKGDRYGGGIVFYILQPGDAGYEAW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHH KQHGLISALNDQSSGTEWSNIKDVPVFRTQTAIGTGRQNTEFITAQAGHISSAAKICADY HHCCCEEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH VHEGHSDWYLPSRDELNILCKSNVLDCGNYEDAHWSSSEATPNDAWAQLEGSAPHYQMKQ HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHH IGIKVRAIRSF HCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA