| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ywfO [H]
Identifier: 119358046
GI number: 119358046
Start: 2607447
End: 2608856
Strand: Direct
Name: ywfO [H]
Synonym: Cpha266_2274
Alternate gene names: 119358046
Gene position: 2607447-2608856 (Clockwise)
Preceding gene: 119358045
Following gene: 119358047
Centisome position: 83.2
GC content: 51.91
Gene sequence:
>1410_bases ATGATAGCCGAACACCTGCTTTTTCAATCCGACGGCGGCTTTATCCGCATCCCGATCTGGGGCCACATTCCGCTAAGCGG ACCATTGAAAAAAATTCTCTCACACCCCTCGTTTCTTCGTCTTAAAGGGATACGGCAGCTCTCGTTTTCGCAGCAGGTAT ACCCTGGCGCCACGCACACCCGCTTTGAGCACTCCATTGGAGTCTATCACCTCATGAAGCTGATTCTGCAGCGCATGCTG ACCAGCCCCCTTGCGCTCAGCCTTCAGGATGACCGGTTCAGGTTTGACGACCACAACTGCAGGGTACTGCTCTCTGCCTG TCTTCTGCACGATATCGGCCATTTCCCCCACGCTCATATCATCGAGGAGCAAATTCCGATTTGCGGCACGGAACCGATTT TCTCGCACCACGAGGAGCTCTGCCGACACTTTATTTATGAGGTGCATCCCGGAGTTCCCGCAATCGCTGAAATATTGCAG GAGGAGTGGCTGGTATCGCCTGAAGAGGTTATAGCCCTCATCACGGGCAGTTCCGGCACCCGGTTCACCAAGCTCATCAG CGGCACGCTCGACCCCGACAAGATGGACTATCTCATGCGTGACGCTCACCACTGCAACATTCCCTACGGAAGCATTGATA TCGAGCGACTCATTGAGTCATTTGTACCTGATCCGGAACGAGAACGGTTCGCCATTACGGAAAAAGGGATTGCTCCGCTT GAAAGCCTGCTTTTTGCCAAATACATGATGATGCGCAACGTTTACTGGCACCATACCAGCAGGGCGCTTTCGGCAATGCT CCGAAGACTTCTGCAGGATATTGCGCTCAACTGCATGCTCTCTGCAGACGCATTGCGCGAGCTTTTTTACGGAAACGCCG ATGATCGGGTGCTGTACGAGCTGAAACAGCTTATGCCGGAAAAAGACCACCCGCTTTGCTCGCTGCTTGACGATATACTC ATGCGCAAGGTCTATAAAAGGGCTGTAACCATACAACCCTACCTGCCGGATTCCGCAAAAGAGGATGAGCGATGGTTCAT CTATAATGGGGACGGCGACAGGCGACGGGCAATGGAAGTGAAAATCTGCCGGTTTCTCAACAAACGGTACCATCTCGGAC TCCATGGCCACGAAGTGCTTATCGACCCGCCATCAAAAAAAGACATCTTTGATTACAACGATCTGAAAGAGCTCCGGGTC TACCCGACACGCTCTGAACATGTACATTACTCGCTGCAACTTTCTTCGGAATATGTGCGTTTCGATGATTTCAGGGAGTC GGTATTCCGCTCCGATTTTATTCTCTCTTTCGAACGCTATACCAAGAAGTTCCGGTTGCTTTCCCGCATGGACCTCGTTG AGTATATTGTTGCATCGGAGAGTGAAATCATGGCCCTCCTGCAAGAGTAG
Upstream 100 bases:
>100_bases GATAATCAATAGCGAACCCTGACAAATTCCCCGCTTCCCGGAGACCCTTTTCTTGCGTATCTTTGCCGATAACGTTTACC CCTGCAACCGCACTATTTTC
Downstream 100 bases:
>100_bases AATGTGTATATTACGTTTAAGCAACACAACAAAACACTATCGCACTATGGAACAGCATCAGGATAAATTCTACAAGGGGC TCTTCTACGGCGCCGGCCTG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MIAEHLLFQSDGGFIRIPIWGHIPLSGPLKKILSHPSFLRLKGIRQLSFSQQVYPGATHTRFEHSIGVYHLMKLILQRML TSPLALSLQDDRFRFDDHNCRVLLSACLLHDIGHFPHAHIIEEQIPICGTEPIFSHHEELCRHFIYEVHPGVPAIAEILQ EEWLVSPEEVIALITGSSGTRFTKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERERFAITEKGIAPL ESLLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIALNCMLSADALRELFYGNADDRVLYELKQLMPEKDHPLCSLLDDIL MRKVYKRAVTIQPYLPDSAKEDERWFIYNGDGDRRRAMEVKICRFLNKRYHLGLHGHEVLIDPPSKKDIFDYNDLKELRV YPTRSEHVHYSLQLSSEYVRFDDFRESVFRSDFILSFERYTKKFRLLSRMDLVEYIVASESEIMALLQE
Sequences:
>Translated_469_residues MIAEHLLFQSDGGFIRIPIWGHIPLSGPLKKILSHPSFLRLKGIRQLSFSQQVYPGATHTRFEHSIGVYHLMKLILQRML TSPLALSLQDDRFRFDDHNCRVLLSACLLHDIGHFPHAHIIEEQIPICGTEPIFSHHEELCRHFIYEVHPGVPAIAEILQ EEWLVSPEEVIALITGSSGTRFTKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERERFAITEKGIAPL ESLLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIALNCMLSADALRELFYGNADDRVLYELKQLMPEKDHPLCSLLDDIL MRKVYKRAVTIQPYLPDSAKEDERWFIYNGDGDRRRAMEVKICRFLNKRYHLGLHGHEVLIDPPSKKDIFDYNDLKELRV YPTRSEHVHYSLQLSSEYVRFDDFRESVFRSDFILSFERYTKKFRLLSRMDLVEYIVASESEIMALLQE >Mature_469_residues MIAEHLLFQSDGGFIRIPIWGHIPLSGPLKKILSHPSFLRLKGIRQLSFSQQVYPGATHTRFEHSIGVYHLMKLILQRML TSPLALSLQDDRFRFDDHNCRVLLSACLLHDIGHFPHAHIIEEQIPICGTEPIFSHHEELCRHFIYEVHPGVPAIAEILQ EEWLVSPEEVIALITGSSGTRFTKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERERFAITEKGIAPL ESLLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIALNCMLSADALRELFYGNADDRVLYELKQLMPEKDHPLCSLLDDIL MRKVYKRAVTIQPYLPDSAKEDERWFIYNGDGDRRRAMEVKICRFLNKRYHLGLHGHEVLIDPPSKKDIFDYNDLKELRV YPTRSEHVHYSLQLSSEYVRFDDFRESVFRSDFILSFERYTKKFRLLSRMDLVEYIVASESEIMALLQE
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=280, Percent_Identity=26.4285714285714, Blast_Score=89, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54810; Mature: 54810
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEHLLFQSDGGFIRIPIWGHIPLSGPLKKILSHPSFLRLKGIRQLSFSQQVYPGATHT CCCHHCEEECCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC RFEHSIGVYHLMKLILQRMLTSPLALSLQDDRFRFDDHNCRVLLSACLLHDIGHFPHAHI HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCHHH IEEQIPICGTEPIFSHHEELCRHFIYEVHPGVPAIAEILQEEWLVSPEEVIALITGSSGT HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCC RFTKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERERFAITEKGIAPL HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHH ESLLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIALNCMLSADALRELFYGNADDRVLYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LKQLMPEKDHPLCSLLDDILMRKVYKRAVTIQPYLPDSAKEDERWFIYNGDGDRRRAMEV HHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH KICRFLNKRYHLGLHGHEVLIDPPSKKDIFDYNDLKELRVYPTRSEHVHYSLQLSSEYVR HHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCHHH FDDFRESVFRSDFILSFERYTKKFRLLSRMDLVEYIVASESEIMALLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MIAEHLLFQSDGGFIRIPIWGHIPLSGPLKKILSHPSFLRLKGIRQLSFSQQVYPGATHT CCCHHCEEECCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC RFEHSIGVYHLMKLILQRMLTSPLALSLQDDRFRFDDHNCRVLLSACLLHDIGHFPHAHI HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCCHHH IEEQIPICGTEPIFSHHEELCRHFIYEVHPGVPAIAEILQEEWLVSPEEVIALITGSSGT HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCC RFTKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERERFAITEKGIAPL HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHH ESLLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIALNCMLSADALRELFYGNADDRVLYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LKQLMPEKDHPLCSLLDDILMRKVYKRAVTIQPYLPDSAKEDERWFIYNGDGDRRRAMEV HHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH KICRFLNKRYHLGLHGHEVLIDPPSKKDIFDYNDLKELRVYPTRSEHVHYSLQLSSEYVR HHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCHHH FDDFRESVFRSDFILSFERYTKKFRLLSRMDLVEYIVASESEIMALLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 7934828 [H]