| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358028
Identifier: 119358028
GI number: 119358028
Start: 2582589
End: 2583620
Strand: Reverse
Name: 119358028
Synonym: Cpha266_2256
Alternate gene names: NA
Gene position: 2583620-2582589 (Counterclockwise)
Preceding gene: 119358029
Following gene: 119358027
Centisome position: 82.44
GC content: 32.95
Gene sequence:
>1032_bases ATGAAAGTATGCTCATCTTGTTTTTCTGATAAAGAGTTAAAAGGTTTTATTTTAACTAGTAATGAATTTGGTGATTGTCT GGTTTGTAATGCAACATCACAAAATCTTTTAGATATAACGGAATTATATGATTTCTTTCAGGAATTAATTGGAAACTTCA AAATTGGTAAAAGTGGCTTACCTCTTAGTTCTAAAATTCAATCTGATTGGAGTTTTTTTAGCTCAAATGAAATTGCAATT AAGATTTTAAACTATCTAATTCCTCAGATTCATACAGAAATAACTTCATCAGATGACCTGGTTGAGTATTCGGACGATAT TTTAGCAAATTTCGGACATTGGGAGACTCTCAAAGATGAATTAAAATGGAAAAATAGATTTGTTATTGATGTGCATCGAT TAGGTAAGGGCGAATTTAATTGGGATGCTTTTCTTCGTGATATTAATACTCTATTCAGCCTAACAAATAAGGTGGAATTA TTTAGAGCCAGAATTCATAACAAAAGTGGGATGCCTGTTTATCCAATCAATGAAATGAGTTGTCCGCCAAAAGAGCTTGC AAGCGGAGGTCGAGCAAATCCTGCAGGAATTCCTTTTCTTTATTTGAGTGAAGATGAAAATACCGTTTTATATGAGGTTA GAGCGTCGTATTTAGATGAGATTAGTGTTGGTGTTTTTCAATTAAAGGAAGATATTGAATCTGTTGACATTGTCGATTTC ACAAAAGACTCTCCTTTGTTTCAGCCTGAATATGTTAAAGAAGCAATTCAGGGGAAACTTTTACGAGATAGAATTAGCAA AGACCTCTCAAAACCAATGAGAAGATATGATAGCGAATTAGAGTATATACCGACTCAATTTATTTGTGAATACATTAAAG TGTTTACGGGAGCAAAGGGTATTCGCTTTCGAAGTTCGCTTCACATACAAGGGAACAATATGGTTTTCTTTGAGCCTGAT TTAATGGAATGCAAGACGGTCAAAAAAGTAAAAATCAGAAATATTAACTTAAGCTCGATAGACATAAATTGA
Upstream 100 bases:
>100_bases ATGATAATAAGCATTACCCCGGTTTAGGAACAGTAAAAAAAATATCTATTAAAAATCATTTGTTGGTTATAAGCAAATTT TTAAAGAATAGATAGTGATT
Downstream 100 bases:
>100_bases AAGCACTATGCGGTAACAGCCGTTATGCAAAGAGGAATAGGGGACGCAGTGCAATAGCGTAGAAGATTGTATTTGGCAGT GCAGTGAGAAAACAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKVCSSCFSDKELKGFILTSNEFGDCLVCNATSQNLLDITELYDFFQELIGNFKIGKSGLPLSSKIQSDWSFFSSNEIAI KILNYLIPQIHTEITSSDDLVEYSDDILANFGHWETLKDELKWKNRFVIDVHRLGKGEFNWDAFLRDINTLFSLTNKVEL FRARIHNKSGMPVYPINEMSCPPKELASGGRANPAGIPFLYLSEDENTVLYEVRASYLDEISVGVFQLKEDIESVDIVDF TKDSPLFQPEYVKEAIQGKLLRDRISKDLSKPMRRYDSELEYIPTQFICEYIKVFTGAKGIRFRSSLHIQGNNMVFFEPD LMECKTVKKVKIRNINLSSIDIN
Sequences:
>Translated_343_residues MKVCSSCFSDKELKGFILTSNEFGDCLVCNATSQNLLDITELYDFFQELIGNFKIGKSGLPLSSKIQSDWSFFSSNEIAI KILNYLIPQIHTEITSSDDLVEYSDDILANFGHWETLKDELKWKNRFVIDVHRLGKGEFNWDAFLRDINTLFSLTNKVEL FRARIHNKSGMPVYPINEMSCPPKELASGGRANPAGIPFLYLSEDENTVLYEVRASYLDEISVGVFQLKEDIESVDIVDF TKDSPLFQPEYVKEAIQGKLLRDRISKDLSKPMRRYDSELEYIPTQFICEYIKVFTGAKGIRFRSSLHIQGNNMVFFEPD LMECKTVKKVKIRNINLSSIDIN >Mature_343_residues MKVCSSCFSDKELKGFILTSNEFGDCLVCNATSQNLLDITELYDFFQELIGNFKIGKSGLPLSSKIQSDWSFFSSNEIAI KILNYLIPQIHTEITSSDDLVEYSDDILANFGHWETLKDELKWKNRFVIDVHRLGKGEFNWDAFLRDINTLFSLTNKVEL FRARIHNKSGMPVYPINEMSCPPKELASGGRANPAGIPFLYLSEDENTVLYEVRASYLDEISVGVFQLKEDIESVDIVDF TKDSPLFQPEYVKEAIQGKLLRDRISKDLSKPMRRYDSELEYIPTQFICEYIKVFTGAKGIRFRSSLHIQGNNMVFFEPD LMECKTVKKVKIRNINLSSIDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39379; Mature: 39379
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCSSCFSDKELKGFILTSNEFGDCLVCNATSQNLLDITELYDFFQELIGNFKIGKSGL CCCHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCC PLSSKIQSDWSFFSSNEIAIKILNYLIPQIHTEITSSDDLVEYSDDILANFGHWETLKDE CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LKWKNRFVIDVHRLGKGEFNWDAFLRDINTLFSLTNKVELFRARIHNKSGMPVYPINEMS HHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC CPPKELASGGRANPAGIPFLYLSEDENTVLYEVRASYLDEISVGVFQLKEDIESVDIVDF CCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEE TKDSPLFQPEYVKEAIQGKLLRDRISKDLSKPMRRYDSELEYIPTQFICEYIKVFTGAKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCC IRFRSSLHIQGNNMVFFEPDLMECKTVKKVKIRNINLSSIDIN CEEEEEEEEECCEEEEECCCHHHHHHHHEEEEEECCCEEEECC >Mature Secondary Structure MKVCSSCFSDKELKGFILTSNEFGDCLVCNATSQNLLDITELYDFFQELIGNFKIGKSGL CCCHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCC PLSSKIQSDWSFFSSNEIAIKILNYLIPQIHTEITSSDDLVEYSDDILANFGHWETLKDE CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LKWKNRFVIDVHRLGKGEFNWDAFLRDINTLFSLTNKVELFRARIHNKSGMPVYPINEMS HHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC CPPKELASGGRANPAGIPFLYLSEDENTVLYEVRASYLDEISVGVFQLKEDIESVDIVDF CCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEE TKDSPLFQPEYVKEAIQGKLLRDRISKDLSKPMRRYDSELEYIPTQFICEYIKVFTGAKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCC IRFRSSLHIQGNNMVFFEPDLMECKTVKKVKIRNINLSSIDIN CEEEEEEEEECCEEEEECCCHHHHHHHHEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA