| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358011
Identifier: 119358011
GI number: 119358011
Start: 2561845
End: 2562363
Strand: Direct
Name: 119358011
Synonym: Cpha266_2235
Alternate gene names: NA
Gene position: 2561845-2562363 (Clockwise)
Preceding gene: 119358009
Following gene: 119358042
Centisome position: 81.75
GC content: 39.31
Gene sequence:
>519_bases ATGACAAACCAAACGAAATCCTCTACCGGCATGAAATACCTGAAAATTGCTTGTTCTATATTTGTAATTCTTGCATGTAA CGTTCAGGCTTTTGCTGCAGCATGGGATTATGTTAATGAAGCGAAAAATTACCAATACTATATAGATGTTTCCTCTGTCA AGAGCGAAGACGGTATTATAAGCGCATGGATGAAGGAAGTGCTAAAGAAAAAAGCAAAACCCTATATAGTATCAGGTCAA ACGGTACATGAATCCAAGTTCAAAATTCAAGCTCTGGAAAGCTCAGACAAAATTAGAGTCGTAGATACAGTTTACTATAA TAGTCGTGGAGAAGTTATTAGGCGGCTGGACGCACAATATTCTGAATTTGTAGAGCCGGTTCCCGAAACAATAGGGGAAT TCTGGCTACTTACTCTTTACGTGTGTAAAGTAATGCATTCAGATTCATCTAAAAATCAGATCCTTGGGGCTCCAGAAGAA CATGCTACGCCGTTGCCGAACGATAAGCAGAGAAGATGA
Upstream 100 bases:
>100_bases CCTCACTGCAAAATACAATTTTCTACGCTATTGCACTGCGTCCCCTATTCCCCTTCTGTTTTTATAACGCTTAAGCAAGA CTCTTCCCCTATATTGATAC
Downstream 100 bases:
>100_bases TGCGTTGTAGAATCAGCGGAATTTAAATGACTGTTGGGGAGTTTCCGATATGCGGCCTGCTAAAGAAATTCAAGCACCTC CTTTTAATAAAGGACATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTNQTKSSTGMKYLKIACSIFVILACNVQAFAAAWDYVNEAKNYQYYIDVSSVKSEDGIISAWMKEVLKKKAKPYIVSGQ TVHESKFKIQALESSDKIRVVDTVYYNSRGEVIRRLDAQYSEFVEPVPETIGEFWLLTLYVCKVMHSDSSKNQILGAPEE HATPLPNDKQRR
Sequences:
>Translated_172_residues MTNQTKSSTGMKYLKIACSIFVILACNVQAFAAAWDYVNEAKNYQYYIDVSSVKSEDGIISAWMKEVLKKKAKPYIVSGQ TVHESKFKIQALESSDKIRVVDTVYYNSRGEVIRRLDAQYSEFVEPVPETIGEFWLLTLYVCKVMHSDSSKNQILGAPEE HATPLPNDKQRR >Mature_171_residues TNQTKSSTGMKYLKIACSIFVILACNVQAFAAAWDYVNEAKNYQYYIDVSSVKSEDGIISAWMKEVLKKKAKPYIVSGQT VHESKFKIQALESSDKIRVVDTVYYNSRGEVIRRLDAQYSEFVEPVPETIGEFWLLTLYVCKVMHSDSSKNQILGAPEEH ATPLPNDKQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19599; Mature: 19467
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQTKSSTGMKYLKIACSIFVILACNVQAFAAAWDYVNEAKNYQYYIDVSSVKSEDGII CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHH SAWMKEVLKKKAKPYIVSGQTVHESKFKIQALESSDKIRVVDTVYYNSRGEVIRRLDAQY HHHHHHHHHHHCCCEEECCCEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHH SEFVEPVPETIGEFWLLTLYVCKVMHSDSSKNQILGAPEEHATPLPNDKQRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure TNQTKSSTGMKYLKIACSIFVILACNVQAFAAAWDYVNEAKNYQYYIDVSSVKSEDGII CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHH SAWMKEVLKKKAKPYIVSGQTVHESKFKIQALESSDKIRVVDTVYYNSRGEVIRRLDAQY HHHHHHHHHHHCCCEEECCCEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHH SEFVEPVPETIGEFWLLTLYVCKVMHSDSSKNQILGAPEEHATPLPNDKQRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA