| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357972
Identifier: 119357972
GI number: 119357972
Start: 2525166
End: 2526227
Strand: Reverse
Name: 119357972
Synonym: Cpha266_2189
Alternate gene names: NA
Gene position: 2526227-2525166 (Counterclockwise)
Preceding gene: 119357973
Following gene: 119357971
Centisome position: 80.61
GC content: 49.62
Gene sequence:
>1062_bases ATGAGCATGAGAAAAAAAACAGGTAAGGAGGTCTCTATTGTTCGCTCCTCGGCGGCTGAATACCTGACCTTTATCGCTGC CAGCGGCACAGGGGGCGTCGATGCGGTTTATGCCGATGAAAATATCTGGCTTACCCAGAAGATGATGGGGGTGCTCTATG ACGTGGCGACTCATACCATAAACTATCACCTGAAAAAAGTTTTTTCAGACAGCGAATTACAGGAGGACTCAGTTATTCGA AATTTTCGAATAACTGCCCGAGACGGAAAAAACTACAACACCAAACATTACAGTCTTGCTGCTGTCATTGCCGTCGGTTA CAAGGTAAATTCCGAACGTGCAGTACAATTCCGCAAGTGGGCGACCACTATCATTAAGGAGTTCACCATCAAGGGCTATG CCATGGATGACGAACGACTGAAAAGCGGTGGCTCCATCCTTACCGACCAGTATTTTGAAGAGCAGTTGCAGCGTATTCGG GAGATTCGCTTGAGTGAACGCAAGTTCTACCAGAAGGTCACCGACATCTATGCAACCTCCATCGATTACGACGTGACAGC CCAGGCTACCAAGCGCTTTTTCGCTACCGTGCAGAATAAACTGCACTGGGCAATACATGCAGAGACCGCAGCGGAGGTTA TCTATAACCGGGCCGATGCCGAAAAACAGAATATGGGGTTGACCACCTGGAAGGATGCTCCCGGAGGAAAGATCCAGAAG TTCGACGTTGTGGTCGCAAAGAACTACCTGACCGAACATGAAATAGCACAACTTTCACGGTTGGTTTCGGCATACCTGGA TGTTGCAGAGGACATGGCGCTACGCAAGATGCCCATGACCATGCAGGACTGGGAAACCCGCCTCAATCGCTTCATCGCAG CGACTGATCGTGAAATTCTTCAGGATCCGGGCAAAGTGACTGCAGAAATTGCCAAAGCTCATGCCGAAAGTGAGTTTGAA AAGTACCGCATCGTTCAGGACAGGCTATTCGAAAGCGACTTCGACAGAATGGTCAAGGAGATCGAGTCTCTGCAGAAGCC GAAGGGAGGGGGTGATGAGTAG
Upstream 100 bases:
>100_bases AACACTTCTCCGAGCTGCATGTCGAGGATAACGACGGGATGCAGCAGGCATTCAAGGCCGAACTGATGGCTTGCCTTTTG ATAGACAGGATGGTGAATAT
Downstream 100 bases:
>100_bases GATGGAAGCACGTATCAAATCCATTCTGCTATCATTGCCGGGAGTGGAGGGGGGAAGTTCATGAAATCATGAATTTACGA TGACCAGAATGCAGCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSMRKKTGKEVSIVRSSAAEYLTFIAASGTGGVDAVYADENIWLTQKMMGVLYDVATHTINYHLKKVFSDSELQEDSVIR NFRITARDGKNYNTKHYSLAAVIAVGYKVNSERAVQFRKWATTIIKEFTIKGYAMDDERLKSGGSILTDQYFEEQLQRIR EIRLSERKFYQKVTDIYATSIDYDVTAQATKRFFATVQNKLHWAIHAETAAEVIYNRADAEKQNMGLTTWKDAPGGKIQK FDVVVAKNYLTEHEIAQLSRLVSAYLDVAEDMALRKMPMTMQDWETRLNRFIAATDREILQDPGKVTAEIAKAHAESEFE KYRIVQDRLFESDFDRMVKEIESLQKPKGGGDE
Sequences:
>Translated_353_residues MSMRKKTGKEVSIVRSSAAEYLTFIAASGTGGVDAVYADENIWLTQKMMGVLYDVATHTINYHLKKVFSDSELQEDSVIR NFRITARDGKNYNTKHYSLAAVIAVGYKVNSERAVQFRKWATTIIKEFTIKGYAMDDERLKSGGSILTDQYFEEQLQRIR EIRLSERKFYQKVTDIYATSIDYDVTAQATKRFFATVQNKLHWAIHAETAAEVIYNRADAEKQNMGLTTWKDAPGGKIQK FDVVVAKNYLTEHEIAQLSRLVSAYLDVAEDMALRKMPMTMQDWETRLNRFIAATDREILQDPGKVTAEIAKAHAESEFE KYRIVQDRLFESDFDRMVKEIESLQKPKGGGDE >Mature_352_residues SMRKKTGKEVSIVRSSAAEYLTFIAASGTGGVDAVYADENIWLTQKMMGVLYDVATHTINYHLKKVFSDSELQEDSVIRN FRITARDGKNYNTKHYSLAAVIAVGYKVNSERAVQFRKWATTIIKEFTIKGYAMDDERLKSGGSILTDQYFEEQLQRIRE IRLSERKFYQKVTDIYATSIDYDVTAQATKRFFATVQNKLHWAIHAETAAEVIYNRADAEKQNMGLTTWKDAPGGKIQKF DVVVAKNYLTEHEIAQLSRLVSAYLDVAEDMALRKMPMTMQDWETRLNRFIAATDREILQDPGKVTAEIAKAHAESEFEK YRIVQDRLFESDFDRMVKEIESLQKPKGGGDE
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40430; Mature: 40299
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRKKTGKEVSIVRSSAAEYLTFIAASGTGGVDAVYADENIWLTQKMMGVLYDVATHTI CCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHH NYHLKKVFSDSELQEDSVIRNFRITARDGKNYNTKHYSLAAVIAVGYKVNSERAVQFRKW HHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHH ATTIIKEFTIKGYAMDDERLKSGGSILTDQYFEEQLQRIREIRLSERKFYQKVTDIYATS HHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDYDVTAQATKRFFATVQNKLHWAIHAETAAEVIYNRADAEKQNMGLTTWKDAPGGKIQK CCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCEEE FDVVVAKNYLTEHEIAQLSRLVSAYLDVAEDMALRKMPMTMQDWETRLNRFIAATDREIL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH QDPGKVTAEIAKAHAESEFEKYRIVQDRLFESDFDRMVKEIESLQKPKGGGDE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SMRKKTGKEVSIVRSSAAEYLTFIAASGTGGVDAVYADENIWLTQKMMGVLYDVATHTI CCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHH NYHLKKVFSDSELQEDSVIRNFRITARDGKNYNTKHYSLAAVIAVGYKVNSERAVQFRKW HHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHH ATTIIKEFTIKGYAMDDERLKSGGSILTDQYFEEQLQRIREIRLSERKFYQKVTDIYATS HHHHHHHHHHCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDYDVTAQATKRFFATVQNKLHWAIHAETAAEVIYNRADAEKQNMGLTTWKDAPGGKIQK CCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCEEE FDVVVAKNYLTEHEIAQLSRLVSAYLDVAEDMALRKMPMTMQDWETRLNRFIAATDREIL EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH QDPGKVTAEIAKAHAESEFEKYRIVQDRLFESDFDRMVKEIESLQKPKGGGDE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA