| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357956
Identifier: 119357956
GI number: 119357956
Start: 2512371
End: 2512907
Strand: Direct
Name: 119357956
Synonym: Cpha266_2171
Alternate gene names: NA
Gene position: 2512371-2512907 (Clockwise)
Preceding gene: 119357955
Following gene: 119357960
Centisome position: 80.17
GC content: 57.91
Gene sequence:
>537_bases ATGTCATCCGGCTCAATGGATTTTACTTCATTTACCGCGACGGCGTATGGTTCCGTTCTCCCTCTTTCCGTGGACCATGG TCTCGTGTCAGATATTTTGATCTCCCCTACCAGATCAGAAAACATAATTGGAACGATATCAGGCGTCGCCGCGACCTTGA ATACCGCAAACGAGACAAAACCTACTGGAACAGGCATTTCGAGGAACAGAGAATCCGGGACAGACGTAACGACCGGGACA GAAGACCTGATTTCAGACCGGATGGCAGGCCTGACGGCAGACCCGATGGCAGACCGGACGGCAGGCCTGATTTCAGACCG GATGGCAGGCCTGACGGCAGGCCTGACGGCAGACCGGACGGCAGACCGGACGGCAGACCGGACGGCAGACCGGACGGCAG ACCGGATTTCAGACCGGATGGCAGGCCTGACGGCAGGCCTGACGGCAGACCGGACGGCAGACCGAACGGCAGACCGAACG GCAGACCTGATTTCAGACCGGATGGCAGACCATAGACAGGACAGGACTCTACCATAA
Upstream 100 bases:
>100_bases CTCAACATCGGGGGCAGCCCCGCTGTAGTTGTAGACAGAAGTCCCGACTTCATCTACCTCGACGATTACGGTTTAGCCGT TTCCTAGAGATGGAACTACG
Downstream 100 bases:
>100_bases CCAGAAAGACAGGAAGCCCTTTCTCCGGCTTCCTGTCTCTCTTTTCCCGGGATAACCGTCGGATCACCGGTATGGAATGC AGTCTGAAACCGCTTCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSSGSMDFTSFTATAYGSVLPLSVDHGLVSDILISPTRSENIIGTISGVAATLNTANETKPTGTGISRNRESGTDVTTGT EDLISDRMAGLTADPMADRTAGLISDRMAGLTAGLTADRTADRTADRTADRTADRISDRMAGLTAGLTADRTADRTADRT ADLISDRMADHRQDRTLP
Sequences:
>Translated_178_residues MSSGSMDFTSFTATAYGSVLPLSVDHGLVSDILISPTRSENIIGTISGVAATLNTANETKPTGTGISRNRESGTDVTTGT EDLISDRMAGLTADPMADRTAGLISDRMAGLTAGLTADRTADRTADRTADRTADRISDRMAGLTAGLTADRTADRTADRT ADLISDRMADHRQDRTLP >Mature_177_residues SSGSMDFTSFTATAYGSVLPLSVDHGLVSDILISPTRSENIIGTISGVAATLNTANETKPTGTGISRNRESGTDVTTGTE DLISDRMAGLTADPMADRTAGLISDRMAGLTAGLTADRTADRTADRTADRTADRISDRMAGLTAGLTADRTADRTADRTA DLISDRMADHRQDRTLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18653; Mature: 18522
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGSMDFTSFTATAYGSVLPLSVDHGLVSDILISPTRSENIIGTISGVAATLNTANETK CCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCC PTGTGISRNRESGTDVTTGTEDLISDRMAGLTADPMADRTAGLISDRMAGLTAGLTADRT CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC ADRTADRTADRTADRISDRMAGLTAGLTADRTADRTADRTADLISDRMADHRQDRTLP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSGSMDFTSFTATAYGSVLPLSVDHGLVSDILISPTRSENIIGTISGVAATLNTANETK CCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCC PTGTGISRNRESGTDVTTGTEDLISDRMAGLTADPMADRTAGLISDRMAGLTAGLTADRT CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC ADRTADRTADRTADRISDRMAGLTAGLTADRTADRTADRTADLISDRMADHRQDRTLP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA