Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357886

Identifier: 119357886

GI number: 119357886

Start: 2427965

End: 2428528

Strand: Reverse

Name: 119357886

Synonym: Cpha266_2094

Alternate gene names: NA

Gene position: 2428528-2427965 (Counterclockwise)

Preceding gene: 119357887

Following gene: 119357878

Centisome position: 77.49

GC content: 51.42

Gene sequence:

>564_bases
ATGAAAAGAGATATGGCTGCTGATCAGTTGGATCGCCCTTCCCTGCCTGTTTCAGGAAGGGTTTACACCGTGCTGTCAGG
TGCGGTTCTTGTTTTGCTTTCGACAACCGTCCCCTATCTTACGCTGCTCAATGCCTTTTTTATGGCAGGGATTTTCATGG
CGGGCATGTTCTCGATCTATTTTGCCGTTATGCACTACCAGATCCGGCTATCGTACAGCGATGCCTTTCTGTTTGCAAGT
CTTGGCGGCATAGCAGGAGGTCTCATTTCCGAGATTGCCGGCTATCTTCTCATGGAGTATGCGGGTTACAGGCCCGGCGC
TGAAAGTCTTATGCTGCTGGTCGGCTGGGTTCATCAACTGGCCGACGGAAATCCCGAACTTGTCGAACTGGTTCGCGAGC
TTGATCGGGAGGCAGAGTCGATAGCCCGGATTTCGCCGGATATCAATCTGAAAGATCTTCTTGTCTGGATCGTGGTTTCT
GCAGGTTTATATGCGCCAGTTACAGGTCTGGGGGGGATATTTATGGTTTTCAGACTCAAACGTCAGGCGGCGAAGGCTCG
ATAG

Upstream 100 bases:

>100_bases
TTGCCGGAGGAGCCGTTCATGCAGCCGAATGGCTCGCAGGGATGCATTGTGAGAAACCCGGATTTTATACCATGGATGAT
TTTCTCAACGAAAGGCTTTC

Downstream 100 bases:

>100_bases
TCGGCACAAGAGCCTCTCCGGCAAGTTGGCGGTATTGCTTTCTGTCGATTTTTTGTGAACCCGCAAGAGTTTCCCACTGA
AGGGTTCTGGTAATCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS
LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS
AGLYAPVTGLGGIFMVFRLKRQAAKAR

Sequences:

>Translated_187_residues
MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS
LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS
AGLYAPVTGLGGIFMVFRLKRQAAKAR
>Mature_187_residues
MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS
LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS
AGLYAPVTGLGGIFMVFRLKRQAAKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20457; Mature: 20457

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIY
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVMHYQIRLSYSDAFLFASLGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQL
HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVSAGLYAPVTGLGGIFMVFRLK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RQAAKAR
HHHHCCC
>Mature Secondary Structure
MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIY
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVMHYQIRLSYSDAFLFASLGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQL
HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVSAGLYAPVTGLGGIFMVFRLK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RQAAKAR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA