| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357886
Identifier: 119357886
GI number: 119357886
Start: 2427965
End: 2428528
Strand: Reverse
Name: 119357886
Synonym: Cpha266_2094
Alternate gene names: NA
Gene position: 2428528-2427965 (Counterclockwise)
Preceding gene: 119357887
Following gene: 119357878
Centisome position: 77.49
GC content: 51.42
Gene sequence:
>564_bases ATGAAAAGAGATATGGCTGCTGATCAGTTGGATCGCCCTTCCCTGCCTGTTTCAGGAAGGGTTTACACCGTGCTGTCAGG TGCGGTTCTTGTTTTGCTTTCGACAACCGTCCCCTATCTTACGCTGCTCAATGCCTTTTTTATGGCAGGGATTTTCATGG CGGGCATGTTCTCGATCTATTTTGCCGTTATGCACTACCAGATCCGGCTATCGTACAGCGATGCCTTTCTGTTTGCAAGT CTTGGCGGCATAGCAGGAGGTCTCATTTCCGAGATTGCCGGCTATCTTCTCATGGAGTATGCGGGTTACAGGCCCGGCGC TGAAAGTCTTATGCTGCTGGTCGGCTGGGTTCATCAACTGGCCGACGGAAATCCCGAACTTGTCGAACTGGTTCGCGAGC TTGATCGGGAGGCAGAGTCGATAGCCCGGATTTCGCCGGATATCAATCTGAAAGATCTTCTTGTCTGGATCGTGGTTTCT GCAGGTTTATATGCGCCAGTTACAGGTCTGGGGGGGATATTTATGGTTTTCAGACTCAAACGTCAGGCGGCGAAGGCTCG ATAG
Upstream 100 bases:
>100_bases TTGCCGGAGGAGCCGTTCATGCAGCCGAATGGCTCGCAGGGATGCATTGTGAGAAACCCGGATTTTATACCATGGATGAT TTTCTCAACGAAAGGCTTTC
Downstream 100 bases:
>100_bases TCGGCACAAGAGCCTCTCCGGCAAGTTGGCGGTATTGCTTTCTGTCGATTTTTTGTGAACCCGCAAGAGTTTCCCACTGA AGGGTTCTGGTAATCTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS AGLYAPVTGLGGIFMVFRLKRQAAKAR
Sequences:
>Translated_187_residues MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS AGLYAPVTGLGGIFMVFRLKRQAAKAR >Mature_187_residues MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIYFAVMHYQIRLSYSDAFLFAS LGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQLADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVS AGLYAPVTGLGGIFMVFRLKRQAAKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20457; Mature: 20457
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIY CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVMHYQIRLSYSDAFLFASLGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQL HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVSAGLYAPVTGLGGIFMVFRLK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH RQAAKAR HHHHCCC >Mature Secondary Structure MKRDMAADQLDRPSLPVSGRVYTVLSGAVLVLLSTTVPYLTLLNAFFMAGIFMAGMFSIY CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVMHYQIRLSYSDAFLFASLGGIAGGLISEIAGYLLMEYAGYRPGAESLMLLVGWVHQL HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ADGNPELVELVRELDREAESIARISPDINLKDLLVWIVVSAGLYAPVTGLGGIFMVFRLK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH RQAAKAR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA