| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357835
Identifier: 119357835
GI number: 119357835
Start: 2363044
End: 2364114
Strand: Direct
Name: 119357835
Synonym: Cpha266_2043
Alternate gene names: NA
Gene position: 2363044-2364114 (Clockwise)
Preceding gene: 119357834
Following gene: 119357865
Centisome position: 75.4
GC content: 43.51
Gene sequence:
>1071_bases ATGGATCTCGGACTATTCAAAACAGTAGTCACAGAATCAGGATTGGATGGAAAGCCTATTTTTCTGCTCTGCGATCTTGA GTTCATCAATGAAATTTCATACAGTTACAAAAAAACACTTACAAATTTTATGTATAGCTGTAATCTGAAATTTCGAATGA TTGTTTTCTGCAACATCACACCAAACTTCCGGACGATGGTCGAATCGTTTCAGGCAGTAATGCCGGATGGGCTTGAAACA ATAATTGTTAATAATTATCAGGAAGCCATCGAAAATATAATTACTTTTAAAGCAGGAACATACAGGCATCCCGAACCGGA ATCAGAAGCCGAGCACCATGAAAAAGCAATTAAAAAGCATTTTCTTGCAACTATAGCGAGAATATCGTGGTTTAATATGC TTGACCAGCATATTGCTTTACCTTCTGCAGATGATAAATACTATACATTTATTAAGGCGATAGAGGCAATGCAGGCCGAC ATTCGCGAAAAAGAAAAGGAAAAAAACATGGAACTGGAACACATGAAACACGACGAAGAGCAAAAACAGACCGAAATGGT CGTGAAGCTGAACGCACAGATTGAGCTCAACAAAAAAGCCGCTCGCGAACACGAAAAGGAGATCGCGGCCCTCAAAACAA GAATCGCCACACAGGATATGGAGCTGACAAGAGTGTCGACAGCGATAGCTGAAAAAACCATGTCGCTGCGCAACCTGCTC GACAAAATCTACGCGCTCGATATTGATACCGATGTAAAAAGACAGATGACCGACTCCTGCCTCAGCCTGATCGAAACCGA AACCATCGAAAAACGGCTCAACATTGAGCTCACCGAATCCGACTCGGTATTTCTGTCAAGACTGCAGAAAAAACATCCGC ATCTCAACCAGAGAGAGCTTCGCATCAGCCTGCTCGTCAAACTGAACTACGACACCAAAGAAATCGCCCGTTCAGTCGGC ATCTCCACCAGAGGCATGGAAAGCATTCGCTACCGGATGCACAAAAAACTGGGACTCGGAAAACACCAGTCAATAAAAAC CTACCTCTCCGACCTGGCCGCCTCATTCTGA
Upstream 100 bases:
>100_bases TGGGTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAACATTATACTCTTTTGCGTCGAAGCACATA AAGCGATCTCTCTGGATTCC
Downstream 100 bases:
>100_bases AATTGAGAGCCTCGACATATCAACCAGTAATGCGACAAACCGGAATATAAACCGGTTGTCGCTGTTCGGGACGCTAAAAG CAAACGGGCAAAAAGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MDLGLFKTVVTESGLDGKPIFLLCDLEFINEISYSYKKTLTNFMYSCNLKFRMIVFCNITPNFRTMVESFQAVMPDGLET IIVNNYQEAIENIITFKAGTYRHPEPESEAEHHEKAIKKHFLATIARISWFNMLDQHIALPSADDKYYTFIKAIEAMQAD IREKEKEKNMELEHMKHDEEQKQTEMVVKLNAQIELNKKAAREHEKEIAALKTRIATQDMELTRVSTAIAEKTMSLRNLL DKIYALDIDTDVKRQMTDSCLSLIETETIEKRLNIELTESDSVFLSRLQKKHPHLNQRELRISLLVKLNYDTKEIARSVG ISTRGMESIRYRMHKKLGLGKHQSIKTYLSDLAASF
Sequences:
>Translated_356_residues MDLGLFKTVVTESGLDGKPIFLLCDLEFINEISYSYKKTLTNFMYSCNLKFRMIVFCNITPNFRTMVESFQAVMPDGLET IIVNNYQEAIENIITFKAGTYRHPEPESEAEHHEKAIKKHFLATIARISWFNMLDQHIALPSADDKYYTFIKAIEAMQAD IREKEKEKNMELEHMKHDEEQKQTEMVVKLNAQIELNKKAAREHEKEIAALKTRIATQDMELTRVSTAIAEKTMSLRNLL DKIYALDIDTDVKRQMTDSCLSLIETETIEKRLNIELTESDSVFLSRLQKKHPHLNQRELRISLLVKLNYDTKEIARSVG ISTRGMESIRYRMHKKLGLGKHQSIKTYLSDLAASF >Mature_356_residues MDLGLFKTVVTESGLDGKPIFLLCDLEFINEISYSYKKTLTNFMYSCNLKFRMIVFCNITPNFRTMVESFQAVMPDGLET IIVNNYQEAIENIITFKAGTYRHPEPESEAEHHEKAIKKHFLATIARISWFNMLDQHIALPSADDKYYTFIKAIEAMQAD IREKEKEKNMELEHMKHDEEQKQTEMVVKLNAQIELNKKAAREHEKEIAALKTRIATQDMELTRVSTAIAEKTMSLRNLL DKIYALDIDTDVKRQMTDSCLSLIETETIEKRLNIELTESDSVFLSRLQKKHPHLNQRELRISLLVKLNYDTKEIARSVG ISTRGMESIRYRMHKKLGLGKHQSIKTYLSDLAASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41294; Mature: 41294
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGLFKTVVTESGLDGKPIFLLCDLEFINEISYSYKKTLTNFMYSCNLKFRMIVFCNIT CCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC PNFRTMVESFQAVMPDGLETIIVNNYQEAIENIITFKAGTYRHPEPESEAEHHEKAIKKH CCHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH FLATIARISWFNMLDQHIALPSADDKYYTFIKAIEAMQADIREKEKEKNMELEHMKHDEE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH QKQTEMVVKLNAQIELNKKAAREHEKEIAALKTRIATQDMELTRVSTAIAEKTMSLRNLL HHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DKIYALDIDTDVKRQMTDSCLSLIETETIEKRLNIELTESDSVFLSRLQKKHPHLNQREL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHCCCCCHHHE RISLLVKLNYDTKEIARSVGISTRGMESIRYRMHKKLGLGKHQSIKTYLSDLAASF EEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDLGLFKTVVTESGLDGKPIFLLCDLEFINEISYSYKKTLTNFMYSCNLKFRMIVFCNIT CCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC PNFRTMVESFQAVMPDGLETIIVNNYQEAIENIITFKAGTYRHPEPESEAEHHEKAIKKH CCHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH FLATIARISWFNMLDQHIALPSADDKYYTFIKAIEAMQADIREKEKEKNMELEHMKHDEE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH QKQTEMVVKLNAQIELNKKAAREHEKEIAALKTRIATQDMELTRVSTAIAEKTMSLRNLL HHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DKIYALDIDTDVKRQMTDSCLSLIETETIEKRLNIELTESDSVFLSRLQKKHPHLNQREL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHCCCCCHHHE RISLLVKLNYDTKEIARSVGISTRGMESIRYRMHKKLGLGKHQSIKTYLSDLAASF EEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA