| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357780
Identifier: 119357780
GI number: 119357780
Start: 2300227
End: 2300970
Strand: Reverse
Name: 119357780
Synonym: Cpha266_1987
Alternate gene names: NA
Gene position: 2300970-2300227 (Counterclockwise)
Preceding gene: 119357781
Following gene: 119357777
Centisome position: 73.42
GC content: 52.28
Gene sequence:
>744_bases ATGAAAAAAATCTTGTTGGCAATTGTTGCTCTGTCGAGCCTCGTTTATCCGGTTGACATTGCAAGCGCTGCAACAGTGGC CGGTGTCCGCACTGAGCAGGTGCGGTTCTCCCCTGGCGCTTCATCGGCGGTCATCAAGGGTACGCTGAAGGGTGACGGGG ATGTTGATTATGTTGTGCCGGCAGGGGCAGGCCAGACTCTTGCCGTTACCTTGAAAAAAACCAATCCTCAGAACTATTTC AATATCAATCCGCCTGATGGGAGCCTGGCTATGTTTGTCGGGCAGTCAGGTAATGATTTCAAGGGTGTGCTCCCTTCCGA CGGCAACTATACGGTAAGGGTCTATCTGATGCGTCCCGCTGCACGTCGGAACGAGACAAGCACCTATACGCTCTCGGTTT CTGTGACCGGCAACCCTCTGAAGGCTACTCCCGCATCACAGGATGCGCTCATTCCGGGTACGCCATTTCATGCATCAACT TCGATTGCCTGCGAGTTGTCCATCGACCCCAGGGTTCGTAACTGCGAGGCTTTTGTTATCCGCCGGGGGTTTGACGGAAC CGCCACCGTTGTGGCGCATTGGCCGGATGGTATGAAGCGAAGCATTCTTTTTGTTAAAGGCAGGCCTGTTGTATCAGATG CACAGACATCATTAACCGTTACCAAAAAAGATCGGCTTACTCTTGTCAGTATCGGAACCGATGAACGGTATGAAATTCCA GACGAGCTTGTTTTTGGTGGCTGA
Upstream 100 bases:
>100_bases AAATAATTGTCATTGTGTTTTATCCGATCATTACGGTGAGCAAAGAAGGATTTCTCTGCTTTTTTTATCTGTTACGAGAG TACAAGCAATAGGGATACAA
Downstream 100 bases:
>100_bases TCGAACGATACAGTTCCATTAACGGTTGAGGGGTGCTCTGATGTTTGCGTTTCGTTTGTGGTGTTACAATCCCGATGTTT TTATCGGGTTCCCTTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKKILLAIVALSSLVYPVDIASAATVAGVRTEQVRFSPGASSAVIKGTLKGDGDVDYVVPAGAGQTLAVTLKKTNPQNYF NINPPDGSLAMFVGQSGNDFKGVLPSDGNYTVRVYLMRPAARRNETSTYTLSVSVTGNPLKATPASQDALIPGTPFHAST SIACELSIDPRVRNCEAFVIRRGFDGTATVVAHWPDGMKRSILFVKGRPVVSDAQTSLTVTKKDRLTLVSIGTDERYEIP DELVFGG
Sequences:
>Translated_247_residues MKKILLAIVALSSLVYPVDIASAATVAGVRTEQVRFSPGASSAVIKGTLKGDGDVDYVVPAGAGQTLAVTLKKTNPQNYF NINPPDGSLAMFVGQSGNDFKGVLPSDGNYTVRVYLMRPAARRNETSTYTLSVSVTGNPLKATPASQDALIPGTPFHAST SIACELSIDPRVRNCEAFVIRRGFDGTATVVAHWPDGMKRSILFVKGRPVVSDAQTSLTVTKKDRLTLVSIGTDERYEIP DELVFGG >Mature_247_residues MKKILLAIVALSSLVYPVDIASAATVAGVRTEQVRFSPGASSAVIKGTLKGDGDVDYVVPAGAGQTLAVTLKKTNPQNYF NINPPDGSLAMFVGQSGNDFKGVLPSDGNYTVRVYLMRPAARRNETSTYTLSVSVTGNPLKATPASQDALIPGTPFHAST SIACELSIDPRVRNCEAFVIRRGFDGTATVVAHWPDGMKRSILFVKGRPVVSDAQTSLTVTKKDRLTLVSIGTDERYEIP DELVFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26263; Mature: 26263
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLAIVALSSLVYPVDIASAATVAGVRTEQVRFSPGASSAVIKGTLKGDGDVDYVVP CHHHHHHHHHHHHHEEEEECCCCCEEECCEEEEEEECCCCCCEEEEEEECCCCCEEEEEE AGAGQTLAVTLKKTNPQNYFNINPPDGSLAMFVGQSGNDFKGVLPSDGNYTVRVYLMRPA CCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCEECCCCCCEEEEEEEECCC ARRNETSTYTLSVSVTGNPLKATPASQDALIPGTPFHASTSIACELSIDPRVRNCEAFVI CCCCCCEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE RRGFDGTATVVAHWPDGMKRSILFVKGRPVVSDAQTSLTVTKKDRLTLVSIGTDERYEIP EECCCCEEEEEEECCCCCCEEEEEEECCCEECCCCCEEEEEECCCEEEEEECCCCCCCCC DELVFGG HHEECCC >Mature Secondary Structure MKKILLAIVALSSLVYPVDIASAATVAGVRTEQVRFSPGASSAVIKGTLKGDGDVDYVVP CHHHHHHHHHHHHHEEEEECCCCCEEECCEEEEEEECCCCCCEEEEEEECCCCCEEEEEE AGAGQTLAVTLKKTNPQNYFNINPPDGSLAMFVGQSGNDFKGVLPSDGNYTVRVYLMRPA CCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCEECCCCCCEEEEEEEECCC ARRNETSTYTLSVSVTGNPLKATPASQDALIPGTPFHASTSIACELSIDPRVRNCEAFVI CCCCCCEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE RRGFDGTATVVAHWPDGMKRSILFVKGRPVVSDAQTSLTVTKKDRLTLVSIGTDERYEIP EECCCCEEEEEEECCCCCCEEEEEEECCCEECCCCCEEEEEECCCEEEEEECCCCCCCCC DELVFGG HHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA