| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357730
Identifier: 119357730
GI number: 119357730
Start: 2241697
End: 2242383
Strand: Reverse
Name: 119357730
Synonym: Cpha266_1934
Alternate gene names: NA
Gene position: 2242383-2241697 (Counterclockwise)
Preceding gene: 119357731
Following gene: 119357729
Centisome position: 71.55
GC content: 48.47
Gene sequence:
>687_bases ATGAAACCTGTCAAAGTGATCTCAGAGCATACATCGTCACTCAATGAGCGCCTCAAACTCTCTTTCGGTCTTACGGCCAT GATCTGGATTGTGGGATTTGTCGGGCATTTTACCTCTTTTCAGGAGTGGCCGGCCCTTTTTCTCTACCTTTTCGGCTCAA TCGGTCTTGTTCTTTATCGGGGAAAGCGTTATGACGAGTGGCAGAAGATGTACCTTGCCGGAGGTGACCTTTCGAAATCC CTGAAGTGGGGCGGTATTGCCGGGTTGCTGCTTTTTGTTATGGATGTTTCCAACACGGTCATGTACTATAAAAGCGGCGG TGCTCCAATGGCGGAGATGCAGATTATTCTTGTCAACCGATCGTTGCTCTATCTGTTTCCCATACTCGTATTTGCCGAAG AGTTTCTCTGGAGAGGCATCATGCTTTCCGCCATGATCGAGAGGGGTTTCAACAAGCATCTTACGGTTTTTCTTACAGCC ATGTTTTATGTGATCAACCACTTTGCCGTTGCTCCGGTCGGCCTCAGGGAGCGGGCATTGATGGCGATGATGGCTTTTCC CATCGGCATGCTCGGAGGTTATATCGTGCTGAGGTCCAGAAATGTCTGGGGGAGTGTGCTGGTGCACATGATCACCATGT TGTCCATGATTATCGATATTTTTCTTATTCCACAACTCCTGTTCTGA
Upstream 100 bases:
>100_bases GACTATATTTGACGTGTTTCTTTTAGCTGACCTCTTTCGACCACCCAAACAACATATACAGAGAATTGCGTCCGATTAAC TTAAAGCCTGTTTACCCTTC
Downstream 100 bases:
>100_bases CCACAAAGGTTTTTCCTATGCCTGAAAACAGAATCGCCCGTCTTCTGAAGAAGAATAAAAAACTGCTGATAGCCTACTAT ATGCCTGAATTTCCTGTGCC
Product: abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKPVKVISEHTSSLNERLKLSFGLTAMIWIVGFVGHFTSFQEWPALFLYLFGSIGLVLYRGKRYDEWQKMYLAGGDLSKS LKWGGIAGLLLFVMDVSNTVMYYKSGGAPMAEMQIILVNRSLLYLFPILVFAEEFLWRGIMLSAMIERGFNKHLTVFLTA MFYVINHFAVAPVGLRERALMAMMAFPIGMLGGYIVLRSRNVWGSVLVHMITMLSMIIDIFLIPQLLF
Sequences:
>Translated_228_residues MKPVKVISEHTSSLNERLKLSFGLTAMIWIVGFVGHFTSFQEWPALFLYLFGSIGLVLYRGKRYDEWQKMYLAGGDLSKS LKWGGIAGLLLFVMDVSNTVMYYKSGGAPMAEMQIILVNRSLLYLFPILVFAEEFLWRGIMLSAMIERGFNKHLTVFLTA MFYVINHFAVAPVGLRERALMAMMAFPIGMLGGYIVLRSRNVWGSVLVHMITMLSMIIDIFLIPQLLF >Mature_228_residues MKPVKVISEHTSSLNERLKLSFGLTAMIWIVGFVGHFTSFQEWPALFLYLFGSIGLVLYRGKRYDEWQKMYLAGGDLSKS LKWGGIAGLLLFVMDVSNTVMYYKSGGAPMAEMQIILVNRSLLYLFPILVFAEEFLWRGIMLSAMIERGFNKHLTVFLTA MFYVINHFAVAPVGLRERALMAMMAFPIGMLGGYIVLRSRNVWGSVLVHMITMLSMIIDIFLIPQLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25943; Mature: 25943
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVKVISEHTSSLNERLKLSFGLTAMIWIVGFVGHFTSFQEWPALFLYLFGSIGLVLYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GKRYDEWQKMYLAGGDLSKSLKWGGIAGLLLFVMDVSNTVMYYKSGGAPMAEMQIILVNR CCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHEEEEEECC SLLYLFPILVFAEEFLWRGIMLSAMIERGFNKHLTVFLTAMFYVINHFAVAPVGLRERAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MAMMAFPIGMLGGYIVLRSRNVWGSVLVHMITMLSMIIDIFLIPQLLF HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKPVKVISEHTSSLNERLKLSFGLTAMIWIVGFVGHFTSFQEWPALFLYLFGSIGLVLYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC GKRYDEWQKMYLAGGDLSKSLKWGGIAGLLLFVMDVSNTVMYYKSGGAPMAEMQIILVNR CCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHEEEEEECC SLLYLFPILVFAEEFLWRGIMLSAMIERGFNKHLTVFLTAMFYVINHFAVAPVGLRERAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MAMMAFPIGMLGGYIVLRSRNVWGSVLVHMITMLSMIIDIFLIPQLLF HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA