| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357725
Identifier: 119357725
GI number: 119357725
Start: 2237623
End: 2238033
Strand: Direct
Name: 119357725
Synonym: Cpha266_1929
Alternate gene names: NA
Gene position: 2237623-2238033 (Clockwise)
Preceding gene: 119357722
Following gene: 119357726
Centisome position: 71.4
GC content: 51.09
Gene sequence:
>411_bases ATGAAAACCGAATCCGAACGTTTTGAAATCCGCATTGAAGTGCAATCTGCTGATATAGACATGCAGAATCATGTCAATAA CGTTGTCTATCTCCAATGGGTACAGGATGTCGCAACTGCACACTGGAGCGCCATTGCGCCGCAAGAGGATCAGGAAAAGC TGGTTTGGGTCGTACGCCGCCATGAAATCGACTATAAACGGCCAGCGCTGAGAGACGATACCATCCTTGCCCGGACATGG ATCGGAAAGGCCTCACGCTTTGCGTTTGACCGGCATACAGAAATAGTCCGTGCGCTCGACGGAAAAACTCTTGCCGTTGC CCGGACAGTCTGGTGCCCTGTAGATCGCAACTCCGGCAGACCGACAGAGGTAAGTCACGAAATTCGCTCGCTCTTTTCAG TTATCGAGTAA
Upstream 100 bases:
>100_bases ATTATCGGCTCTCTTTGCAATCTTCGACACAGGAAGTCATGCTGATGATCCTGTTTCAGATCGCAAGCTGTATTTTACCA TAAAATATTCCCTGAAAAGC
Downstream 100 bases:
>100_bases TACGGCAATAATTTCCAATAGTGCGTATGCCGTCGCATCCAGACATAAAGAACCATTGCAGCGGAACCTGTTTGCGCGTA CATTGAAAGAAAAAATAATC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; Acyl-ACP Thioesterase; Thioesterase-Like; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKTESERFEIRIEVQSADIDMQNHVNNVVYLQWVQDVATAHWSAIAPQEDQEKLVWVVRRHEIDYKRPALRDDTILARTW IGKASRFAFDRHTEIVRALDGKTLAVARTVWCPVDRNSGRPTEVSHEIRSLFSVIE
Sequences:
>Translated_136_residues MKTESERFEIRIEVQSADIDMQNHVNNVVYLQWVQDVATAHWSAIAPQEDQEKLVWVVRRHEIDYKRPALRDDTILARTW IGKASRFAFDRHTEIVRALDGKTLAVARTVWCPVDRNSGRPTEVSHEIRSLFSVIE >Mature_136_residues MKTESERFEIRIEVQSADIDMQNHVNNVVYLQWVQDVATAHWSAIAPQEDQEKLVWVVRRHEIDYKRPALRDDTILARTW IGKASRFAFDRHTEIVRALDGKTLAVARTVWCPVDRNSGRPTEVSHEIRSLFSVIE
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15868; Mature: 15868
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTESERFEIRIEVQSADIDMQNHVNNVVYLQWVQDVATAHWSAIAPQEDQEKLVWVVRR CCCCCCEEEEEEEEECCCCCHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HEIDYKRPALRDDTILARTWIGKASRFAFDRHTEIVRALDGKTLAVARTVWCPVDRNSGR HCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC PTEVSHEIRSLFSVIE CCHHHHHHHHHHHHCC >Mature Secondary Structure MKTESERFEIRIEVQSADIDMQNHVNNVVYLQWVQDVATAHWSAIAPQEDQEKLVWVVRR CCCCCCEEEEEEEEECCCCCHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHH HEIDYKRPALRDDTILARTWIGKASRFAFDRHTEIVRALDGKTLAVARTVWCPVDRNSGR HCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC PTEVSHEIRSLFSVIE CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA