| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357690
Identifier: 119357690
GI number: 119357690
Start: 2199722
End: 2201044
Strand: Reverse
Name: 119357690
Synonym: Cpha266_1894
Alternate gene names: NA
Gene position: 2201044-2199722 (Counterclockwise)
Preceding gene: 119357691
Following gene: 119357689
Centisome position: 70.23
GC content: 47.54
Gene sequence:
>1323_bases ATGGGAAATCTGTCAGCAATTTACGAACGGTTGTCAACCGAGCCTTTAAAGGGTGATGAGCTGGATTCCTATTATGTTGA TGCGTTTGAGGGGCGGGGCGACAACCCTGTTATGTCCCTTAAAAGACGCCTGCTCGACAAACCTGGCGGGAAGCTCCAGA TCCTTTTTTCCGGTTATCGCGGGTGCGGTAAAAGTACCGAACTGAATAAACTGCAGCATGATATCCGCGACGATTTCATT GTGCTGAATTTTTCGATACGCGAAGAACTTGATCTGGTGAACATCAACTATGTCGAGCTGTTTGTAATTACCATGGAAAA ACTGTTCGAAGTTGTCGGGTCGTACAACATCGACATTAATCCTCAGTTGTACAAAAGCGTGAGCGAATGGAGCCGTACGG TTGAAATAGAAAAAATAAGGTTGTTGACAGGCGAGGCTCTCCTCGAAGCCGGAGCTGAAGTGGAGGTGAGCGTACCCCTT TTTGCCCGTTTTTTTGGTAAAATGCGTGCTGCCGCCAATGCGAGTTTCTCCACAAAAAAGACCATCATCGAGAGCATTGA GCCCCGGCTTTCGGATCTTATCGGCCATTGCAACGACCTGATTCGTGAAGTCAAGAACAAACTTTCAAAAAGCGGAAAAA AAGGGCTGGTCATCATTATCGAAGATCTCGATAAATTGAGTGTCGAAAAAGCCGAAGAGCTGTTTTTCAATCACAGCCAT CTTCTCGGTACTCTGCAGACCCATGTGATTTTCACCTTTCCGGTCTCACTCTGTTACCATTCCAAATCCACGGTGATTAC GGGCAATTTTGATGAAGATTTTGAGCTGCCGATGGTCAAGGTGCATGACAAGCAGGGTGATCCCTATCCCGAAGGAAGGG ATGCCTTGTACCGCATCATTACGCGCAGGATCGGAACAGAGTGCTTTGAACCATCCGATCTTGTTTACCGGTTTATCGAC GTAAGTGGCGGTTGTTTGCGCGATCTGTTCGGCATGATTCGTGACGCTGCCGACAATGCGCTTAATCATCAACGAACACG AATCAACGAAGCTGATTATACCAGAAGTTTTTTCAGGCTTCGACGCCATTACGAAAACACGATTGCCGAAAAACGGGTGA ATAATGAGCTTGTTACCTCTGTCGGGGAGTATTATGAAACCCTGCGGGCGGTTGCGGTGAGCGAAACAAAAAAGGTTGAC AATACAGGCGCAGTGCTCGACCTGCGCCATAACCTCTGTATTCTCGGCTATAATGATGAAGGATGGTGCGATGTGCATCC GGTTGTTCGCACCATTCTGCAGGAACGGAAGCTCATTCCATGA
Upstream 100 bases:
>100_bases CCGGCTCGGCAGAAAAGAGCATACTATGCCGAGCTGCTTTCGCTTTGATCGGTAAACATTTCGTATTTTGAGCAGTACAA TCCAAAATTCCAATAATGCT
Downstream 100 bases:
>100_bases GCCATATCGATACATCGGACGGAGAGAGCAAGCGGAACCTCAGGGTAGCCGAGCGCTTTTTTCTGCATACCTCCCGCAGC GCTTTTCTGTTTGCCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MGNLSAIYERLSTEPLKGDELDSYYVDAFEGRGDNPVMSLKRRLLDKPGGKLQILFSGYRGCGKSTELNKLQHDIRDDFI VLNFSIREELDLVNINYVELFVITMEKLFEVVGSYNIDINPQLYKSVSEWSRTVEIEKIRLLTGEALLEAGAEVEVSVPL FARFFGKMRAAANASFSTKKTIIESIEPRLSDLIGHCNDLIREVKNKLSKSGKKGLVIIIEDLDKLSVEKAEELFFNHSH LLGTLQTHVIFTFPVSLCYHSKSTVITGNFDEDFELPMVKVHDKQGDPYPEGRDALYRIITRRIGTECFEPSDLVYRFID VSGGCLRDLFGMIRDAADNALNHQRTRINEADYTRSFFRLRRHYENTIAEKRVNNELVTSVGEYYETLRAVAVSETKKVD NTGAVLDLRHNLCILGYNDEGWCDVHPVVRTILQERKLIP
Sequences:
>Translated_440_residues MGNLSAIYERLSTEPLKGDELDSYYVDAFEGRGDNPVMSLKRRLLDKPGGKLQILFSGYRGCGKSTELNKLQHDIRDDFI VLNFSIREELDLVNINYVELFVITMEKLFEVVGSYNIDINPQLYKSVSEWSRTVEIEKIRLLTGEALLEAGAEVEVSVPL FARFFGKMRAAANASFSTKKTIIESIEPRLSDLIGHCNDLIREVKNKLSKSGKKGLVIIIEDLDKLSVEKAEELFFNHSH LLGTLQTHVIFTFPVSLCYHSKSTVITGNFDEDFELPMVKVHDKQGDPYPEGRDALYRIITRRIGTECFEPSDLVYRFID VSGGCLRDLFGMIRDAADNALNHQRTRINEADYTRSFFRLRRHYENTIAEKRVNNELVTSVGEYYETLRAVAVSETKKVD NTGAVLDLRHNLCILGYNDEGWCDVHPVVRTILQERKLIP >Mature_439_residues GNLSAIYERLSTEPLKGDELDSYYVDAFEGRGDNPVMSLKRRLLDKPGGKLQILFSGYRGCGKSTELNKLQHDIRDDFIV LNFSIREELDLVNINYVELFVITMEKLFEVVGSYNIDINPQLYKSVSEWSRTVEIEKIRLLTGEALLEAGAEVEVSVPLF ARFFGKMRAAANASFSTKKTIIESIEPRLSDLIGHCNDLIREVKNKLSKSGKKGLVIIIEDLDKLSVEKAEELFFNHSHL LGTLQTHVIFTFPVSLCYHSKSTVITGNFDEDFELPMVKVHDKQGDPYPEGRDALYRIITRRIGTECFEPSDLVYRFIDV SGGCLRDLFGMIRDAADNALNHQRTRINEADYTRSFFRLRRHYENTIAEKRVNNELVTSVGEYYETLRAVAVSETKKVDN TGAVLDLRHNLCILGYNDEGWCDVHPVVRTILQERKLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50204; Mature: 50073
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLSAIYERLSTEPLKGDELDSYYVDAFEGRGDNPVMSLKRRLLDKPGGKLQILFSGYR CCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC GCGKSTELNKLQHDIRDDFIVLNFSIREELDLVNINYVELFVITMEKLFEVVGSYNIDIN CCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCC PQLYKSVSEWSRTVEIEKIRLLTGEALLEAGAEVEVSVPLFARFFGKMRAAANASFSTKK HHHHHHHHHHHHHEEHHHHEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHH TIIESIEPRLSDLIGHCNDLIREVKNKLSKSGKKGLVIIIEDLDKLSVEKAEELFFNHSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LLGTLQTHVIFTFPVSLCYHSKSTVITGNFDEDFELPMVKVHDKQGDPYPEGRDALYRII HHHHHHHHEEEEEHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH TRRIGTECFEPSDLVYRFIDVSGGCLRDLFGMIRDAADNALNHQRTRINEADYTRSFFRL HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRHYENTIAEKRVNNELVTSVGEYYETLRAVAVSETKKVDNTGAVLDLRHNLCILGYNDE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCC GWCDVHPVVRTILQERKLIP CCEEHHHHHHHHHHHCCCCC >Mature Secondary Structure GNLSAIYERLSTEPLKGDELDSYYVDAFEGRGDNPVMSLKRRLLDKPGGKLQILFSGYR CCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC GCGKSTELNKLQHDIRDDFIVLNFSIREELDLVNINYVELFVITMEKLFEVVGSYNIDIN CCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCC PQLYKSVSEWSRTVEIEKIRLLTGEALLEAGAEVEVSVPLFARFFGKMRAAANASFSTKK HHHHHHHHHHHHHEEHHHHEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHH TIIESIEPRLSDLIGHCNDLIREVKNKLSKSGKKGLVIIIEDLDKLSVEKAEELFFNHSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LLGTLQTHVIFTFPVSLCYHSKSTVITGNFDEDFELPMVKVHDKQGDPYPEGRDALYRII HHHHHHHHEEEEEHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH TRRIGTECFEPSDLVYRFIDVSGGCLRDLFGMIRDAADNALNHQRTRINEADYTRSFFRL HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRHYENTIAEKRVNNELVTSVGEYYETLRAVAVSETKKVDNTGAVLDLRHNLCILGYNDE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCC GWCDVHPVVRTILQERKLIP CCEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA