| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357685
Identifier: 119357685
GI number: 119357685
Start: 2189755
End: 2190159
Strand: Reverse
Name: 119357685
Synonym: Cpha266_1889
Alternate gene names: NA
Gene position: 2190159-2189755 (Counterclockwise)
Preceding gene: 119357687
Following gene: 119357683
Centisome position: 69.89
GC content: 48.4
Gene sequence:
>405_bases ATGGCTTTCGATACATCCAGAAGCTACTATACGATAGGAGAGGTCAGCAAGATTGTCGGCATTCCTGCCTATCTGCTCAG GTATTGGGAAAACTTTTTTACCGAGTTGAACCCGGCACGCGATACCCGCAGCAACAGACGATACACCAATCGTGATATTG CCATGGTACTCAATATCAAGGAGCTTGTTTATGAAAAGGGATACAAGCTTGGAAAGGCAAGCGAGATGGTAAAGGGAGGA ATGGGCCGTACTCCTGAGGGTGACCATAAAACCTCCGAAATTCTCAAGCTGCAGAAGCTGATCGGGCACGAACAGAAAAA ACACACGATTGTAGATGAGCGCCGGATGATGCTGTTGCGCGAGATCAAGGAAGAGATTGAGGATCTGCTCCAGCTGATCG GGTGA
Upstream 100 bases:
>100_bases AGAGCAAGCAGATTTTTCATCCGGTAATTTTTTTTGATATGACTGTAGTAATGTATAATAAGAGAAGCAAAAACAAAATT CTACCAGAACGAGGCATGCC
Downstream 100 bases:
>100_bases GAAGAGCGTGTTACGTGTTAAGTGGGACGTGTTAAGTGTTAAGTGTTTGTCATCCTGATAATACTCCCTGTCATCCCGAT TTTTTTCTGTCATTCCGAAA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAFDTSRSYYTIGEVSKIVGIPAYLLRYWENFFTELNPARDTRSNRRYTNRDIAMVLNIKELVYEKGYKLGKASEMVKGG MGRTPEGDHKTSEILKLQKLIGHEQKKHTIVDERRMMLLREIKEEIEDLLQLIG
Sequences:
>Translated_134_residues MAFDTSRSYYTIGEVSKIVGIPAYLLRYWENFFTELNPARDTRSNRRYTNRDIAMVLNIKELVYEKGYKLGKASEMVKGG MGRTPEGDHKTSEILKLQKLIGHEQKKHTIVDERRMMLLREIKEEIEDLLQLIG >Mature_133_residues AFDTSRSYYTIGEVSKIVGIPAYLLRYWENFFTELNPARDTRSNRRYTNRDIAMVLNIKELVYEKGYKLGKASEMVKGGM GRTPEGDHKTSEILKLQKLIGHEQKKHTIVDERRMMLLREIKEEIEDLLQLIG
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15668; Mature: 15537
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDTSRSYYTIGEVSKIVGIPAYLLRYWENFFTELNPARDTRSNRRYTNRDIAMVLNIK CCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHH ELVYEKGYKLGKASEMVKGGMGRTPEGDHKTSEILKLQKLIGHEQKKHTIVDERRMMLLR HHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EIKEEIEDLLQLIG HHHHHHHHHHHHHC >Mature Secondary Structure AFDTSRSYYTIGEVSKIVGIPAYLLRYWENFFTELNPARDTRSNRRYTNRDIAMVLNIK CCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHH ELVYEKGYKLGKASEMVKGGMGRTPEGDHKTSEILKLQKLIGHEQKKHTIVDERRMMLLR HHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EIKEEIEDLLQLIG HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA