| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357618
Identifier: 119357618
GI number: 119357618
Start: 2079402
End: 2080571
Strand: Reverse
Name: 119357618
Synonym: Cpha266_1822
Alternate gene names: NA
Gene position: 2080571-2079402 (Counterclockwise)
Preceding gene: 119357619
Following gene: 119357617
Centisome position: 66.39
GC content: 45.64
Gene sequence:
>1170_bases GTGCAAAGCCCGCATTTAATCATTATTCCATCTGTTCCTGTCTGGGAAAATGAAGATAATCTGGTTTTTGACCGCAAGTT TTATGATGGAATACTGTTCTACACCCGTAAGTGGGATGGACAGATAACGTGCCTCATGCAGACGAGTAGTGCGGGGTTGC CTGATTTTGGCATTGTCAGTATAAAACGGAGCGAGCTGCCATTTTCATGCATGACATTAGCGTCCGGCGAACTGGTTACA GAAGATCACATAAGGGGAGCCGCTCTTGTTCTTGCATCAGGTGATGCCCATGATCAACTGCATATCAGCGCTCTGTGCAC AAAGACAGGGAGCAAATGTGTCTATGTTATCGAGTATATACCCGAGACCAGATATCAGATAGCTTCATTGAGCACAAAAA ATCCGTTCATACGTTTGCGCAGATATTTTTACATCTGGTTTAATGAAAAAAAACGGATTGCCGCCTTCAGGCTTTCTGAT GGTCTTCAGTCAAACGGCACGCCTGCATATTATGAGTACAGCAAAATTAAAAACAACTTGTTGTATTTCGATACACGCGT CGATAAAAGAAACAATATCAGTGATGGCGATCTGAAAAAAAGAGTCGCCACTCTCTCTGAAGCAAACCCTCTTCATCTTG CTTTTTCCGGTCGTCTGATTCTTATGAAAGGAGCGGATCATCTGGTGCGGCTTGCCCTGATGTTGCGGGATGCCGGTATT CCCTTTCATCTTGCCATTTATGGCGTCGGAGATCTTGAACACGAGATGAGAGAGTACATAAGCAGGAACAGTCTTGGGGG TTACGTATCGATGCCTGGCGCAGTCGATTTCTATACCCGGCTGATTCCGGATATACAGGAAAGCGTTGATCTCTTCGTCT GTTTGCATCGACAGAGCGACCCTTCCTGTACCTATCTGGAGACATTATCCTGCGGAGTTCCGATTGTCGGTTACCAAAAC AGGGCTTTTGCCGGATTGTTGGGGTTGGCTGATATTGGCTGGGGAGTCAGACTGGATGACCTGGAAGGTGTTGTAACGGT TATCGGTCATCTGAACACGCACAGGAACGAGATTGCCGATAAATCAGAAAAGAGTGCTGCGTTTGCACGCCTGCATGATT TTGAAACAACATTTGAAAACAGGATAACTCATTTGCGATCATTGGTGTAA
Upstream 100 bases:
>100_bases TTCGGAACGTGCGGGTTCTCGGTACAGCGGGCTCGGGTTTGTTTTGAATGCATGGTGATTTTATTTCAGTACGACGGTAC CTTAAAAGAAGGAGTTGCAA
Downstream 100 bases:
>100_bases TACTCTTTGACTATTCATTTACAGGAAGGTTTCGGTAGCGTAAAACAGGGCGTTATGCTGATGAGCAAGAAAGGGCGTAC ATCAATTCGGAAGGTCAGGT
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MQSPHLIIIPSVPVWENEDNLVFDRKFYDGILFYTRKWDGQITCLMQTSSAGLPDFGIVSIKRSELPFSCMTLASGELVT EDHIRGAALVLASGDAHDQLHISALCTKTGSKCVYVIEYIPETRYQIASLSTKNPFIRLRRYFYIWFNEKKRIAAFRLSD GLQSNGTPAYYEYSKIKNNLLYFDTRVDKRNNISDGDLKKRVATLSEANPLHLAFSGRLILMKGADHLVRLALMLRDAGI PFHLAIYGVGDLEHEMREYISRNSLGGYVSMPGAVDFYTRLIPDIQESVDLFVCLHRQSDPSCTYLETLSCGVPIVGYQN RAFAGLLGLADIGWGVRLDDLEGVVTVIGHLNTHRNEIADKSEKSAAFARLHDFETTFENRITHLRSLV
Sequences:
>Translated_389_residues MQSPHLIIIPSVPVWENEDNLVFDRKFYDGILFYTRKWDGQITCLMQTSSAGLPDFGIVSIKRSELPFSCMTLASGELVT EDHIRGAALVLASGDAHDQLHISALCTKTGSKCVYVIEYIPETRYQIASLSTKNPFIRLRRYFYIWFNEKKRIAAFRLSD GLQSNGTPAYYEYSKIKNNLLYFDTRVDKRNNISDGDLKKRVATLSEANPLHLAFSGRLILMKGADHLVRLALMLRDAGI PFHLAIYGVGDLEHEMREYISRNSLGGYVSMPGAVDFYTRLIPDIQESVDLFVCLHRQSDPSCTYLETLSCGVPIVGYQN RAFAGLLGLADIGWGVRLDDLEGVVTVIGHLNTHRNEIADKSEKSAAFARLHDFETTFENRITHLRSLV >Mature_389_residues MQSPHLIIIPSVPVWENEDNLVFDRKFYDGILFYTRKWDGQITCLMQTSSAGLPDFGIVSIKRSELPFSCMTLASGELVT EDHIRGAALVLASGDAHDQLHISALCTKTGSKCVYVIEYIPETRYQIASLSTKNPFIRLRRYFYIWFNEKKRIAAFRLSD GLQSNGTPAYYEYSKIKNNLLYFDTRVDKRNNISDGDLKKRVATLSEANPLHLAFSGRLILMKGADHLVRLALMLRDAGI PFHLAIYGVGDLEHEMREYISRNSLGGYVSMPGAVDFYTRLIPDIQESVDLFVCLHRQSDPSCTYLETLSCGVPIVGYQN RAFAGLLGLADIGWGVRLDDLEGVVTVIGHLNTHRNEIADKSEKSAAFARLHDFETTFENRITHLRSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43882; Mature: 43882
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPHLIIIPSVPVWENEDNLVFDRKFYDGILFYTRKWDGQITCLMQTSSAGLPDFGIVS CCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCCCEEEE IKRSELPFSCMTLASGELVTEDHIRGAALVLASGDAHDQLHISALCTKTGSKCVYVIEYI EECCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEC PETRYQIASLSTKNPFIRLRRYFYIWFNEKKRIAAFRLSDGLQSNGTPAYYEYSKIKNNL CCCCEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEHHHHCCCE LYFDTRVDKRNNISDGDLKKRVATLSEANPLHLAFSGRLILMKGADHLVRLALMLRDAGI EEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCC PFHLAIYGVGDLEHEMREYISRNSLGGYVSMPGAVDFYTRLIPDIQESVDLFVCLHRQSD CEEEEEEECCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCC PSCTYLETLSCGVPIVGYQNRAFAGLLGLADIGWGVRLDDLEGVVTVIGHLNTHRNEIAD CCEEEEEHHCCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHC KSEKSAAFARLHDFETTFENRITHLRSLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQSPHLIIIPSVPVWENEDNLVFDRKFYDGILFYTRKWDGQITCLMQTSSAGLPDFGIVS CCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCCCEEEE IKRSELPFSCMTLASGELVTEDHIRGAALVLASGDAHDQLHISALCTKTGSKCVYVIEYI EECCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEC PETRYQIASLSTKNPFIRLRRYFYIWFNEKKRIAAFRLSDGLQSNGTPAYYEYSKIKNNL CCCCEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEHHHHCCCE LYFDTRVDKRNNISDGDLKKRVATLSEANPLHLAFSGRLILMKGADHLVRLALMLRDAGI EEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCC PFHLAIYGVGDLEHEMREYISRNSLGGYVSMPGAVDFYTRLIPDIQESVDLFVCLHRQSD CEEEEEEECCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCC PSCTYLETLSCGVPIVGYQNRAFAGLLGLADIGWGVRLDDLEGVVTVIGHLNTHRNEIAD CCEEEEEHHCCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHC KSEKSAAFARLHDFETTFENRITHLRSLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA