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The map label for this gene is pqqE [H]

Identifier: 119357610

GI number: 119357610

Start: 2069117

End: 2070226

Strand: Reverse

Name: pqqE [H]

Synonym: Cpha266_1814

Alternate gene names: 119357610

Gene position: 2070226-2069117 (Counterclockwise)

Preceding gene: 119357611

Following gene: 119357609

Centisome position: 66.06

GC content: 46.04

Gene sequence:

>1110_bases
ATGAAGGTAACAGAATTGGCTTTGATGGGGTTGAGTCATACGCGCAACGCGGTAGCTGAAGCAGTGTATCTGAAAACCGG
TTTTGATATGACAAAACCCGTTACGTTTCATGCGCTCGTCAATGAGCGATGCAACTGTAAATGCCGTCATTGCGAGTACT
GGCGGCAGGCTGAGTACATTCCTGAACTCTCCATTGAGCAGTGGAAGACGACGCTGCTGAGTATAAAAGAGTTTACCGGA
CACTTTTCGATCAATTTCAGTGGCGGCGAGCCGTTTATCAAAAAGGGATTTATCGATCTGCTTCATTTCTGCAGAGAACA
TGATATTCTTGCAGGAGTTACCACCAATGGAGCCCTCCTTAATGAAAAAAACTCGGCAAGTCTTGTTGCGGCAAGACCCT
TTAACCTTAATATCTCCTGCGATTCCCATATTCCTGAAATTCATGACTATGTCAGGGGAATGAACGGGTTGTTTCGCAAA
ATTTCCGAGGGCATAGCTCTTTTGAAAAAAGAACAGGCAAGGCAGAACATCACCTTTCCGATTATTATCAAGCCGACAAT
TATGTCGCTGAATTTCAGGACTCTTCCCGATATTGTGCAATGGGCTCTTGAAGTTGGCGCAACAGCGGTCAATTTTCAGC
CTCTCGGCAGATGGACCAGAGAAACGTATGATGAACTCTGGATTGAAGAAAATGATTGGCCCGAACTGGAGAGGGTTATG
GAAAAACTGATCGTCATGAAACGGGCTGGTTCACCGATCATGAACAGCGAGGAGATTCTGCATCTCATGACGGCGAGTTT
TCGTGAAGAAAAAGCTTCACCTGAAAATATGCCCTGCAGAATAGGATTACAGGAGTTTTATATCCGACCGGATGGGGAAG
TGAAGTTGTGTTTTCATTTTCCGGGTATCGGCAATACGACGCGACAGTCGGCAAAAGAGATATGGAGGGGGGCGCAGGCT
AAAAAAATTCGGGATGCAACCATAGGGTGCGACAAGCTCTGTCTCTTGACCTGTCTGTCGCAAAAGTCGCTGCTCAACAA
GGTTAATCAGGCGATTACAATTCTTTTGCGTCAGAAAAAACAGGCAACCATCAGTGAACCCGGCATATGA

Upstream 100 bases:

>100_bases
CACGTCTGTTTCAAAGGAGTTTTTTCGGGGAAGATCAACGAAGGATTGATGAGCGGCTGACGGGATTTCTCGGTACTAAC
ATTCCAAAAGGTGCATCCAG

Downstream 100 bases:

>100_bases
ATATGATCAGCATCAATGCTGCAGGCAGACACCATCTTCCCGATATCGATTGCGTCCTCATCGGCGTTAACTGCAGTAAA
ACGCTGGCAAGATGCCTTGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKVTELALMGLSHTRNAVAEAVYLKTGFDMTKPVTFHALVNERCNCKCRHCEYWRQAEYIPELSIEQWKTTLLSIKEFTG
HFSINFSGGEPFIKKGFIDLLHFCREHDILAGVTTNGALLNEKNSASLVAARPFNLNISCDSHIPEIHDYVRGMNGLFRK
ISEGIALLKKEQARQNITFPIIIKPTIMSLNFRTLPDIVQWALEVGATAVNFQPLGRWTRETYDELWIEENDWPELERVM
EKLIVMKRAGSPIMNSEEILHLMTASFREEKASPENMPCRIGLQEFYIRPDGEVKLCFHFPGIGNTTRQSAKEIWRGAQA
KKIRDATIGCDKLCLLTCLSQKSLLNKVNQAITILLRQKKQATISEPGI

Sequences:

>Translated_369_residues
MKVTELALMGLSHTRNAVAEAVYLKTGFDMTKPVTFHALVNERCNCKCRHCEYWRQAEYIPELSIEQWKTTLLSIKEFTG
HFSINFSGGEPFIKKGFIDLLHFCREHDILAGVTTNGALLNEKNSASLVAARPFNLNISCDSHIPEIHDYVRGMNGLFRK
ISEGIALLKKEQARQNITFPIIIKPTIMSLNFRTLPDIVQWALEVGATAVNFQPLGRWTRETYDELWIEENDWPELERVM
EKLIVMKRAGSPIMNSEEILHLMTASFREEKASPENMPCRIGLQEFYIRPDGEVKLCFHFPGIGNTTRQSAKEIWRGAQA
KKIRDATIGCDKLCLLTCLSQKSLLNKVNQAITILLRQKKQATISEPGI
>Mature_369_residues
MKVTELALMGLSHTRNAVAEAVYLKTGFDMTKPVTFHALVNERCNCKCRHCEYWRQAEYIPELSIEQWKTTLLSIKEFTG
HFSINFSGGEPFIKKGFIDLLHFCREHDILAGVTTNGALLNEKNSASLVAARPFNLNISCDSHIPEIHDYVRGMNGLFRK
ISEGIALLKKEQARQNITFPIIIKPTIMSLNFRTLPDIVQWALEVGATAVNFQPLGRWTRETYDELWIEENDWPELERVM
EKLIVMKRAGSPIMNSEEILHLMTASFREEKASPENMPCRIGLQEFYIRPDGEVKLCFHFPGIGNTTRQSAKEIWRGAQA
KKIRDATIGCDKLCLLTCLSQKSLLNKVNQAITILLRQKKQATISEPGI

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42011; Mature: 42011

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTELALMGLSHTRNAVAEAVYLKTGFDMTKPVTFHALVNERCNCKCRHCEYWRQAEYI
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHCCCCCCEEHHHHHHHHHCCC
PELSIEQWKTTLLSIKEFTGHFSINFSGGEPFIKKGFIDLLHFCREHDILAGVTTNGALL
CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEE
NEKNSASLVAARPFNLNISCDSHIPEIHDYVRGMNGLFRKISEGIALLKKEQARQNITFP
ECCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIIKPTIMSLNFRTLPDIVQWALEVGATAVNFQPLGRWTRETYDELWIEENDWPELERVM
EEEECEEEECCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EKLIVMKRAGSPIMNSEEILHLMTASFREEKASPENMPCRIGLQEFYIRPDGEVKLCFHF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHEEECCCCCEEEEEEC
PGIGNTTRQSAKEIWRGAQAKKIRDATIGCDKLCLLTCLSQKSLLNKVNQAITILLRQKK
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATISEPGI
HCCCCCCCC
>Mature Secondary Structure
MKVTELALMGLSHTRNAVAEAVYLKTGFDMTKPVTFHALVNERCNCKCRHCEYWRQAEYI
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHCCCCCCEEHHHHHHHHHCCC
PELSIEQWKTTLLSIKEFTGHFSINFSGGEPFIKKGFIDLLHFCREHDILAGVTTNGALL
CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEE
NEKNSASLVAARPFNLNISCDSHIPEIHDYVRGMNGLFRKISEGIALLKKEQARQNITFP
ECCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIIKPTIMSLNFRTLPDIVQWALEVGATAVNFQPLGRWTRETYDELWIEENDWPELERVM
EEEECEEEECCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EKLIVMKRAGSPIMNSEEILHLMTASFREEKASPENMPCRIGLQEFYIRPDGEVKLCFHF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHEEECCCCCEEEEEEC
PGIGNTTRQSAKEIWRGAQAKKIRDATIGCDKLCLLTCLSQKSLLNKVNQAITILLRQKK
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATISEPGI
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA