Click here to switch to the map view.

The map label for this gene is amsK [H]

Identifier: 119357608

GI number: 119357608

Start: 2066815

End: 2068035

Strand: Reverse

Name: amsK [H]

Synonym: Cpha266_1812

Alternate gene names: 119357608

Gene position: 2068035-2066815 (Counterclockwise)

Preceding gene: 119357609

Following gene: 119357607

Centisome position: 65.99

GC content: 51.35

Gene sequence:

>1221_bases
ATGAAAACAAGAGCGATTGCGTATCTTTGCAGCGAGTATCCGGCTATTTCCCATACTTTTATCTACAGGGAGATTGAGTC
GCTCCGTCAAGCAGGGGTGACCGTCTATCCGGCATCGATCCACAAGCCCTCCAACCTTCAGGTTATGACTTCGGATGAGA
GAGCGGAGGCTGCGCGTACCCTGATGGTGCTTTCACTTCCGATACCCGCCATGGTTGGAGCGCATCTGCACTGTCTTCTT
AAAAATCCGGGAGGTTATGTTCGCATGATCTTCGCTGCCGTCAAACTGCTCACAACGGGACCAAAAAGCCCCTTGAAGGC
CGGCGCATATTTTGCCGAGGCGGGTATTCTTCTTGAGTGGATGCATCGGCATGGTGTTACCCATATTCATGAGCATTTTG
CTAATCCTACTGCTCTTGTTGCCATGCTCATGAAGCGTTATGGCGGAGTGAGCTTCAGTATCTCCGTGCATGGGCCGGAT
ATTTTTTATATCGTCGATACGGCGATGCTTGCTGAAAAAGTTCGCGAAGCGGCGTTTGTGCGCTGCATCAGCCACTATTG
CCGCAGCCAGATTATGCGCATCAGCAAGCCGGAGAGTTGGAAGAAACTTCATATTGTTCGTTGCGGGGTCGATCCCGCCC
TCTATGTTCCGAGGCCGGAACCCGTTAATCCTGTGCCGGATATGCTCTGTGTTGGCAGGCTGGTTCCGGCAAAAGGACAG
CATATTCTGCTCGAAGCCTGTACTCTCCTGAAAAAAGAGGGAGTTCGTTTTCAGTTGACCTTTGTTGGCGACGGCCCTGA
TCGGGACTCTCTTGAACAGTTCAGCGCTTTAGCTGGCCTGAACGGTATGGTAACGTTTACCGGTGCGCTCGGCCAGGACA
AGGTTCGTGATTATTATGACAAGGCCGATCTTTTTGTGCTTGCAAGTTTTGCCGAAGGGGTTCCCGTTGTGCTGATGGAG
GCTATGGCAAAGGAGATACCTGTTATCTCAACGCGGATTACCGGTATACCTGAATTGATTGAGCATGATCGTGACGGATT
GCTTGCAACACCGGGAGACGCCGTGGATCTTGCCCGCCAGATCCGGAGATTGCTTGATGACTCCGGACTTCGCCGTGAGC
TGGGAGTGGCCGGACGGAAAAAAGTTATTGAACTTTACAATCAGCATGGCAACAATAGTGCTATGGTTGATCTTTTTCAC
CTTGAAGGGATCTCCTCATGA

Upstream 100 bases:

>100_bases
AGTTTTTCGGGATCATCCGGTTTCACCTTGGCCGTATTTTCAATAAACCCCTGAAAAACAGGCGCCGAAATCTCAAAACA
GGAATTTCAATTTCCGGCAC

Downstream 100 bases:

>100_bases
TGATTATTGCCGAACTGTTTTTTCAATCTCTCCTCTTGATGTTGGCCTTGCCGGCGGCATATCTGCTGTTGAGTACTGTT
GCAGCATATTTTTTTAAAAA

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKTRAIAYLCSEYPAISHTFIYREIESLRQAGVTVYPASIHKPSNLQVMTSDERAEAARTLMVLSLPIPAMVGAHLHCLL
KNPGGYVRMIFAAVKLLTTGPKSPLKAGAYFAEAGILLEWMHRHGVTHIHEHFANPTALVAMLMKRYGGVSFSISVHGPD
IFYIVDTAMLAEKVREAAFVRCISHYCRSQIMRISKPESWKKLHIVRCGVDPALYVPRPEPVNPVPDMLCVGRLVPAKGQ
HILLEACTLLKKEGVRFQLTFVGDGPDRDSLEQFSALAGLNGMVTFTGALGQDKVRDYYDKADLFVLASFAEGVPVVLME
AMAKEIPVISTRITGIPELIEHDRDGLLATPGDAVDLARQIRRLLDDSGLRRELGVAGRKKVIELYNQHGNNSAMVDLFH
LEGISS

Sequences:

>Translated_406_residues
MKTRAIAYLCSEYPAISHTFIYREIESLRQAGVTVYPASIHKPSNLQVMTSDERAEAARTLMVLSLPIPAMVGAHLHCLL
KNPGGYVRMIFAAVKLLTTGPKSPLKAGAYFAEAGILLEWMHRHGVTHIHEHFANPTALVAMLMKRYGGVSFSISVHGPD
IFYIVDTAMLAEKVREAAFVRCISHYCRSQIMRISKPESWKKLHIVRCGVDPALYVPRPEPVNPVPDMLCVGRLVPAKGQ
HILLEACTLLKKEGVRFQLTFVGDGPDRDSLEQFSALAGLNGMVTFTGALGQDKVRDYYDKADLFVLASFAEGVPVVLME
AMAKEIPVISTRITGIPELIEHDRDGLLATPGDAVDLARQIRRLLDDSGLRRELGVAGRKKVIELYNQHGNNSAMVDLFH
LEGISS
>Mature_406_residues
MKTRAIAYLCSEYPAISHTFIYREIESLRQAGVTVYPASIHKPSNLQVMTSDERAEAARTLMVLSLPIPAMVGAHLHCLL
KNPGGYVRMIFAAVKLLTTGPKSPLKAGAYFAEAGILLEWMHRHGVTHIHEHFANPTALVAMLMKRYGGVSFSISVHGPD
IFYIVDTAMLAEKVREAAFVRCISHYCRSQIMRISKPESWKKLHIVRCGVDPALYVPRPEPVNPVPDMLCVGRLVPAKGQ
HILLEACTLLKKEGVRFQLTFVGDGPDRDSLEQFSALAGLNGMVTFTGALGQDKVRDYYDKADLFVLASFAEGVPVVLME
AMAKEIPVISTRITGIPELIEHDRDGLLATPGDAVDLARQIRRLLDDSGLRRELGVAGRKKVIELYNQHGNNSAMVDLFH
LEGISS

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=377, Percent_Identity=26.2599469496021, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24654571, Length=164, Percent_Identity=28.6585365853659, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44793; Mature: 44793

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRAIAYLCSEYPAISHTFIYREIESLRQAGVTVYPASIHKPSNLQVMTSDERAEAART
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCHHHHHHHE
LMVLSLPIPAMVGAHLHCLLKNPGGYVRMIFAAVKLLTTGPKSPLKAGAYFAEAGILLEW
EEEEECCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MHRHGVTHIHEHFANPTALVAMLMKRYGGVSFSISVHGPDIFYIVDTAMLAEKVREAAFV
HHHCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHH
RCISHYCRSQIMRISKPESWKKLHIVRCGVDPALYVPRPEPVNPVPDMLCVGRLVPAKGQ
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCCCC
HILLEACTLLKKEGVRFQLTFVGDGPDRDSLEQFSALAGLNGMVTFTGALGQDKVRDYYD
CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHC
KADLFVLASFAEGVPVVLMEAMAKEIPVISTRITGIPELIEHDRDGLLATPGDAVDLARQ
CHHHEEEEHHHCCCHHHHHHHHHHHCCEEEHHCCCCHHHHHCCCCCCEECCCHHHHHHHH
IRRLLDDSGLRRELGVAGRKKVIELYNQHGNNSAMVDLFHLEGISS
HHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKTRAIAYLCSEYPAISHTFIYREIESLRQAGVTVYPASIHKPSNLQVMTSDERAEAART
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCHHHHHHHE
LMVLSLPIPAMVGAHLHCLLKNPGGYVRMIFAAVKLLTTGPKSPLKAGAYFAEAGILLEW
EEEEECCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MHRHGVTHIHEHFANPTALVAMLMKRYGGVSFSISVHGPDIFYIVDTAMLAEKVREAAFV
HHHCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHH
RCISHYCRSQIMRISKPESWKKLHIVRCGVDPALYVPRPEPVNPVPDMLCVGRLVPAKGQ
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCCCC
HILLEACTLLKKEGVRFQLTFVGDGPDRDSLEQFSALAGLNGMVTFTGALGQDKVRDYYD
CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHC
KADLFVLASFAEGVPVVLMEAMAKEIPVISTRITGIPELIEHDRDGLLATPGDAVDLARQ
CHHHEEEEHHHCCCHHHHHHHHHHHCCEEEHHCCCCHHHHHCCCCCCEECCCHHHHHHHH
IRRLLDDSGLRRELGVAGRKKVIELYNQHGNNSAMVDLFHLEGISS
HHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]