| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357604
Identifier: 119357604
GI number: 119357604
Start: 2061665
End: 2062900
Strand: Direct
Name: 119357604
Synonym: Cpha266_1807
Alternate gene names: NA
Gene position: 2061665-2062900 (Clockwise)
Preceding gene: 119357602
Following gene: 119357605
Centisome position: 65.79
GC content: 49.84
Gene sequence:
>1236_bases ATGGTGGTTACCCGACGTCGCTGGTTTGAGGCTCCATGGGAGTTCAGGGAAGCATCCCTGTTCAGCCTGCTTGCTATCCT TTCAGGCTTTTTCATACAATATGCCGCATCCGGCAACAGCGTCGGACTTCCTGTTTGGCCATTCAATGCCATAGCGCTTT CTGTTTTTGCCGCACTGATTTTCGGTATCGGGCTTATCCTGAGAAACAATCCTCTTGTCGCCTGGTTCGGCGGCATTCCA ATGGGCCTCAGCCTTATTCTTGCACTTGCGGCACTCTCCTTTATCGGCGGGATGGTGCCTCAGGAAATCATGACCGGGGA CTCTCTCTATACCCGCTTGCGAATCAACCAGATTTTTTCAAGCTGGCCGTTTGCCCTGATTGTTTTTCTGTTTCTGATCA ACCTCGGTTTTTCTCTTGCATGGAAACTCATTCCCTTCAGATCGAAACATCTGCAGTTCGTTCTTTTTCATGCCGGCTTC TGGCTGGCACTTTCATGCGGCATTCTTGGAAGCTCCGACCTTCAGCGACTTGTTATTCCGATTGAAGAGGGCCGAGCCAA TAACCTTGGCTACTCGATGCAAAGCAAAGACCCTGTGCCGTTACCGTTTTCCGTTTTTCTTCACGATTTTTCTCTGGAGG AGTATTCGCCCCAGATACTTCTCTATGATCCTGAAAACGACAAACTTCTCATGGATAAATCTCAAGCCATTATCGAAGTC CATAAGGGAACGAAAGCCGCATGGAAAGGGCTTGAGGTTGTTGTCCTCGATTTTCTCCCTGCAGCTCTTCCGGGAAAAGA CGGGATTCCTCGCCTTTCCGGGCTTCCGGCAGCAATTCCCTATGCCAGGGTCAGGGTACTCTCTGCCGGGGCTCAGGATG AGATGTGGATCAGCACAGGAAGCCCTTTCATGAGACCTGAAGCGGCAAAAATCGGAAACTTCTTTCTGATCATGGTTCCG GGTACGCCAAAAACGTTCCGTTCAGTCGTAACAATTAAGGACAAATCCGGTCACCTGATCGAGGAGAGTCTTGAGGTAAA CAAGCCGGTAAGCTTCAATGGATGGAAGCTCTACCAGATGGGTTACGACGACAAAGCCGGAAAATGGTCGCAACTCAGCC TGATCGAAGTCATCCGTGATCCATGGTTACCGGCGGTCTATATCGGATTCTTTATGATCATGGCTGGAAATCTCCTGTTT TTCTGGAATGGCATCAAACGATCCGGAGGCGCATAA
Upstream 100 bases:
>100_bases ATCTCCTGCAATGAGTGCCCTGATCTCGATGCTCACAGGATTCTGATACACCCTTCTGTTTCCGGTGCATTATTAAACAA GGTTTAGTCCGTTTCAGGTT
Downstream 100 bases:
>100_bases TGGGCATCAATTTCAACACTGCAGCCTTTCTTGCCATTGCGTTATGGGCAGGAGGATCGATACTCCATCCCCTTGCACAA AACAAACCGGCACTTAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MVVTRRRWFEAPWEFREASLFSLLAILSGFFIQYAASGNSVGLPVWPFNAIALSVFAALIFGIGLILRNNPLVAWFGGIP MGLSLILALAALSFIGGMVPQEIMTGDSLYTRLRINQIFSSWPFALIVFLFLINLGFSLAWKLIPFRSKHLQFVLFHAGF WLALSCGILGSSDLQRLVIPIEEGRANNLGYSMQSKDPVPLPFSVFLHDFSLEEYSPQILLYDPENDKLLMDKSQAIIEV HKGTKAAWKGLEVVVLDFLPAALPGKDGIPRLSGLPAAIPYARVRVLSAGAQDEMWISTGSPFMRPEAAKIGNFFLIMVP GTPKTFRSVVTIKDKSGHLIEESLEVNKPVSFNGWKLYQMGYDDKAGKWSQLSLIEVIRDPWLPAVYIGFFMIMAGNLLF FWNGIKRSGGA
Sequences:
>Translated_411_residues MVVTRRRWFEAPWEFREASLFSLLAILSGFFIQYAASGNSVGLPVWPFNAIALSVFAALIFGIGLILRNNPLVAWFGGIP MGLSLILALAALSFIGGMVPQEIMTGDSLYTRLRINQIFSSWPFALIVFLFLINLGFSLAWKLIPFRSKHLQFVLFHAGF WLALSCGILGSSDLQRLVIPIEEGRANNLGYSMQSKDPVPLPFSVFLHDFSLEEYSPQILLYDPENDKLLMDKSQAIIEV HKGTKAAWKGLEVVVLDFLPAALPGKDGIPRLSGLPAAIPYARVRVLSAGAQDEMWISTGSPFMRPEAAKIGNFFLIMVP GTPKTFRSVVTIKDKSGHLIEESLEVNKPVSFNGWKLYQMGYDDKAGKWSQLSLIEVIRDPWLPAVYIGFFMIMAGNLLF FWNGIKRSGGA >Mature_411_residues MVVTRRRWFEAPWEFREASLFSLLAILSGFFIQYAASGNSVGLPVWPFNAIALSVFAALIFGIGLILRNNPLVAWFGGIP MGLSLILALAALSFIGGMVPQEIMTGDSLYTRLRINQIFSSWPFALIVFLFLINLGFSLAWKLIPFRSKHLQFVLFHAGF WLALSCGILGSSDLQRLVIPIEEGRANNLGYSMQSKDPVPLPFSVFLHDFSLEEYSPQILLYDPENDKLLMDKSQAIIEV HKGTKAAWKGLEVVVLDFLPAALPGKDGIPRLSGLPAAIPYARVRVLSAGAQDEMWISTGSPFMRPEAAKIGNFFLIMVP GTPKTFRSVVTIKDKSGHLIEESLEVNKPVSFNGWKLYQMGYDDKAGKWSQLSLIEVIRDPWLPAVYIGFFMIMAGNLLF FWNGIKRSGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45700; Mature: 45700
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTRRRWFEAPWEFREASLFSLLAILSGFFIQYAASGNSVGLPVWPFNAIALSVFAALI CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHH FGIGLILRNNPLVAWFGGIPMGLSLILALAALSFIGGMVPQEIMTGDSLYTRLRINQIFS HHHHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHH SWPFALIVFLFLINLGFSLAWKLIPFRSKHLQFVLFHAGFWLALSCGILGSSDLQRLVIP CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEE IEEGRANNLGYSMQSKDPVPLPFSVFLHDFSLEEYSPQILLYDPENDKLLMDKSQAIIEV ECCCCCCCCCCCCCCCCCCCCCHHHHEECCCHHHCCCEEEEECCCCCCEEEECCCEEEEE HKGTKAAWKGLEVVVLDFLPAALPGKDGIPRLSGLPAAIPYARVRVLSAGAQDEMWISTG ECCCHHHHCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCEEEECC SPFMRPEAAKIGNFFLIMVPGTPKTFRSVVTIKDKSGHLIEESLEVNKPVSFNGWKLYQM CCCCCCCHHCCCCEEEEEECCCCHHHEEEEEEECCCCCEEHHHHCCCCCCCCCCEEEEEE GYDDKAGKWSQLSLIEVIRDPWLPAVYIGFFMIMAGNLLFFWNGIKRSGGA CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC >Mature Secondary Structure MVVTRRRWFEAPWEFREASLFSLLAILSGFFIQYAASGNSVGLPVWPFNAIALSVFAALI CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHH FGIGLILRNNPLVAWFGGIPMGLSLILALAALSFIGGMVPQEIMTGDSLYTRLRINQIFS HHHHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHH SWPFALIVFLFLINLGFSLAWKLIPFRSKHLQFVLFHAGFWLALSCGILGSSDLQRLVIP CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEE IEEGRANNLGYSMQSKDPVPLPFSVFLHDFSLEEYSPQILLYDPENDKLLMDKSQAIIEV ECCCCCCCCCCCCCCCCCCCCCHHHHEECCCHHHCCCEEEEECCCCCCEEEECCCEEEEE HKGTKAAWKGLEVVVLDFLPAALPGKDGIPRLSGLPAAIPYARVRVLSAGAQDEMWISTG ECCCHHHHCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCEEEECC SPFMRPEAAKIGNFFLIMVPGTPKTFRSVVTIKDKSGHLIEESLEVNKPVSFNGWKLYQM CCCCCCCHHCCCCEEEEEECCCCHHHEEEEEEECCCCCEEHHHHCCCCCCCCCCEEEEEE GYDDKAGKWSQLSLIEVIRDPWLPAVYIGFFMIMAGNLLFFWNGIKRSGGA CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA