| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357581
Identifier: 119357581
GI number: 119357581
Start: 2031259
End: 2031591
Strand: Direct
Name: 119357581
Synonym: Cpha266_1784
Alternate gene names: NA
Gene position: 2031259-2031591 (Clockwise)
Preceding gene: 119357578
Following gene: 119357582
Centisome position: 64.82
GC content: 46.55
Gene sequence:
>333_bases GTGACACGTCAAGGTAACGCATCAAACAGTCAAAAAGAACATTCAGCCGTGATTGATTTTCATCGTTCAGCTCCATCCCG ATACCAACAGCAAGATACGGCAAGCGGATCAGGCAATTTCTCTGTTTCAGCAATATCCTCATCGTGTAACCATGATTTGC CAGACAAAAGCTCTGGTTGCAGCATTATCGCACTTCCGATCTTTTCGCATAGCATCGTTGCACAAAACCACACCCCAATC GATGCTCCTGATCCCTCCACCCCCTCCTCAAAAAAAAACCTGATTCGGCGACGACATGCCGCCATCATACCCGAATCGTT ATTTTCACCATAA
Upstream 100 bases:
>100_bases AGATCCGATAAAACCGGATGCGCCGGTCACTAAAGCAACAGTCATAATGCAAATCGGTTAGAGCTATCCTTTACACAAAA AAGTTATCAGGCCAAAATCA
Downstream 100 bases:
>100_bases CGACTCTGGCATACAATACAACATGATACTTTTTTGATAAACGGTACTTATTTTTTAACTTGTTTTAAATAAATAACTAA TAGTCATAGAACATATATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTRQGNASNSQKEHSAVIDFHRSAPSRYQQQDTASGSGNFSVSAISSSCNHDLPDKSSGCSIIALPIFSHSIVAQNHTPI DAPDPSTPSSKKNLIRRRHAAIIPESLFSP
Sequences:
>Translated_110_residues MTRQGNASNSQKEHSAVIDFHRSAPSRYQQQDTASGSGNFSVSAISSSCNHDLPDKSSGCSIIALPIFSHSIVAQNHTPI DAPDPSTPSSKKNLIRRRHAAIIPESLFSP >Mature_109_residues TRQGNASNSQKEHSAVIDFHRSAPSRYQQQDTASGSGNFSVSAISSSCNHDLPDKSSGCSIIALPIFSHSIVAQNHTPID APDPSTPSSKKNLIRRRHAAIIPESLFSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11797; Mature: 11666
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQGNASNSQKEHSAVIDFHRSAPSRYQQQDTASGSGNFSVSAISSSCNHDLPDKSSGC CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC SIIALPIFSHSIVAQNHTPIDAPDPSTPSSKKNLIRRRHAAIIPESLFSP CEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TRQGNASNSQKEHSAVIDFHRSAPSRYQQQDTASGSGNFSVSAISSSCNHDLPDKSSGC CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC SIIALPIFSHSIVAQNHTPIDAPDPSTPSSKKNLIRRRHAAIIPESLFSP CEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA