| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357523
Identifier: 119357523
GI number: 119357523
Start: 1953925
End: 1954725
Strand: Direct
Name: 119357523
Synonym: Cpha266_1726
Alternate gene names: NA
Gene position: 1953925-1954725 (Clockwise)
Preceding gene: 119357522
Following gene: 119357535
Centisome position: 62.35
GC content: 44.69
Gene sequence:
>801_bases GTGGATCATACAAAAATCAACCTTCTTGTCAGGCTTCAGTACCTTGACAATTTGATGGAAAACATCGTCAGTCTTCAGAA AGGTCTGCCCGAAGAGATAAATGCACTTGAAGAAGACCTTGCTTTTACCAAACGCCAGATTGAAGCAAGAAAAAAAGTCG CTGATGAGCACACCAAAAAGAAGCTCCATCTTCTTGAAGCCATTAGTGAGTGTAAGCACAAAATCCTCACATTCAAGGAA AAGCAGACCCTTGCCCGCAACAACAAGGAGTACGATGCTCTCTCAAAGCAGATCGAGTATGAAGAAAAAGAGATCGCTCA GGGAGAAATACAGCTTCAGGATATTGCCCATGCCGAACAGCGTACTCTGGAAACACATCAGAAGGGTCGCCAGCTTATCA ACGAGAACCGTTACGATGAGATTGCAGAAGATATGATTCCTGATGATGTCCTCAAGCAGCAACTTGAAGATCTCACCAGA CAGGTTGAGCTGAAAAAAGATGAACTGAACGGCATCGTCATTGAAACTGCTGATGACGTAGAGACCTTGAAGGTAAAAAT AAGCGACCAGCGACGCCATATTGAAAAAGAAGCCCACCGACTGATTGATAAATATGATCATCTCAGAAGCGGAACTCTTC AGAATGCCGTTGTCAAACTCAACAGAAATGCCTGCTCAGGATGCAATACAAGAGTACCGACCAACCGTCACACCATGATT GTGCAGGGAGGATTCTATCTTTGTGAGTCATGCGGGCGAATTGTGGTGCATGAACGACTTTTTGACGAAGCTGCCGACTG A
Upstream 100 bases:
>100_bases TAAGCGCACAGATTCATTTTTCAGCATGCAAGCATGGTGTGCACCTTTTCACAAGAGAGGTGCTTTTTTTATGCTTTTAT AATCCAAAACAAAGGTCGTA
Downstream 100 bases:
>100_bases ATTTTTTCCGGCAATTTCAGGTTCCCGATTATTGAAGATTTTTTATAAAGCTGAAACCGCAAGTGTGCAGTCGCTGTGTA ACTACAGGTTATACAGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MDHTKINLLVRLQYLDNLMENIVSLQKGLPEEINALEEDLAFTKRQIEARKKVADEHTKKKLHLLEAISECKHKILTFKE KQTLARNNKEYDALSKQIEYEEKEIAQGEIQLQDIAHAEQRTLETHQKGRQLINENRYDEIAEDMIPDDVLKQQLEDLTR QVELKKDELNGIVIETADDVETLKVKISDQRRHIEKEAHRLIDKYDHLRSGTLQNAVVKLNRNACSGCNTRVPTNRHTMI VQGGFYLCESCGRIVVHERLFDEAAD
Sequences:
>Translated_266_residues MDHTKINLLVRLQYLDNLMENIVSLQKGLPEEINALEEDLAFTKRQIEARKKVADEHTKKKLHLLEAISECKHKILTFKE KQTLARNNKEYDALSKQIEYEEKEIAQGEIQLQDIAHAEQRTLETHQKGRQLINENRYDEIAEDMIPDDVLKQQLEDLTR QVELKKDELNGIVIETADDVETLKVKISDQRRHIEKEAHRLIDKYDHLRSGTLQNAVVKLNRNACSGCNTRVPTNRHTMI VQGGFYLCESCGRIVVHERLFDEAAD >Mature_266_residues MDHTKINLLVRLQYLDNLMENIVSLQKGLPEEINALEEDLAFTKRQIEARKKVADEHTKKKLHLLEAISECKHKILTFKE KQTLARNNKEYDALSKQIEYEEKEIAQGEIQLQDIAHAEQRTLETHQKGRQLINENRYDEIAEDMIPDDVLKQQLEDLTR QVELKKDELNGIVIETADDVETLKVKISDQRRHIEKEAHRLIDKYDHLRSGTLQNAVVKLNRNACSGCNTRVPTNRHTMI VQGGFYLCESCGRIVVHERLFDEAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30916; Mature: 30916
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHTKINLLVRLQYLDNLMENIVSLQKGLPEEINALEEDLAFTKRQIEARKKVADEHTKK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLHLLEAISECKHKILTFKEKQTLARNNKEYDALSKQIEYEEKEIAQGEIQLQDIAHAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RTLETHQKGRQLINENRYDEIAEDMIPDDVLKQQLEDLTRQVELKKDELNGIVIETADDV HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC ETLKVKISDQRRHIEKEAHRLIDKYDHLRSGTLQNAVVKLNRNACSGCNTRVPTNRHTMI EEHHEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE VQGGFYLCESCGRIVVHERLFDEAAD EECHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MDHTKINLLVRLQYLDNLMENIVSLQKGLPEEINALEEDLAFTKRQIEARKKVADEHTKK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLHLLEAISECKHKILTFKEKQTLARNNKEYDALSKQIEYEEKEIAQGEIQLQDIAHAEQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RTLETHQKGRQLINENRYDEIAEDMIPDDVLKQQLEDLTRQVELKKDELNGIVIETADDV HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC ETLKVKISDQRRHIEKEAHRLIDKYDHLRSGTLQNAVVKLNRNACSGCNTRVPTNRHTMI EEHHEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE VQGGFYLCESCGRIVVHERLFDEAAD EECHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA