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The map label for this gene is bchD [H]

Identifier: 119357431

GI number: 119357431

Start: 1856541

End: 1858400

Strand: Reverse

Name: bchD [H]

Synonym: Cpha266_1630

Alternate gene names: 119357431

Gene position: 1858400-1856541 (Counterclockwise)

Preceding gene: 119357432

Following gene: 119357430

Centisome position: 59.3

GC content: 53.82

Gene sequence:

>1860_bases
ATGATAGCGTTTACCGACATTGTAGGAATGGATCTGGCAAAGCAGGCACTGATGCTGCTTGCCGTTGATTCATCGCTTGG
AGGTGTTGTTATCCCTTCAGCAGTAGGTTCAGGAAAGTCAACGCTTGCAAGGGCATTTGCCGGTATTCTTCCAGAGGACA
CCCCTTTTGTTGAACTTCCTCTCAACGTTACCGAGGATCGTCTTATTGGCGGCGTTGATCTTGAGGCGACATTGGCGTCC
GGAGTTCGCGTTGTACAGCACGGAGTGCTCTCGAAAGCGCATGGCGGAGTACTCTATGTTGATTCGCTCAGTCTTCTCGA
CAGTTCGGCAGTATCGCATATCATGGATGCCATGTCGCGCGGCGAGGTGCTGGTAGAACGTGAAGGGCTCAGCGAGGTGC
ATCCGGCATCGTTTATGCTGGTGGGTACCTACGATCCCACGGATGGGGATGTTCGTATGGGTCTTCTCGACAGGGTCGGT
ATTATTGTTCCTTTTACCGCCCAGAACGATTACCGTGCCCGGAAGAAAATTGTCACGACGGTGCTTGGCAAGCGGGACGA
GGAAGACACTCGTGATGAACTGAAAATGCTTGCCGGTCTCGTTCAGGCTGCTCGTGAGCAGCTCAAGCACGTTTCAATCA
CCAAAGAACAGGTTCAGGCGCTTATTCAGACCGCGCTCAGCCTTGGCGTTGAGGGTAATCGTGCCGATATCTTTACGATA
CGGGCAGCCCTTGCAAGCGCCGCGCTTGCTCAGCGGAGCGATGTCGAGGACGAGGATATGAAGCTTGCCATCAAGCTTGT
GCTGATTCCTCGCGCTACACGGATGCCCGAGCGCGAACCAGCAGAAGATGAGATGCCTCCGGAGCAAGAGCCTCCGCCGC
CGGATGAAGAACCGGAAGCTGAGGATGAAAGCGCGCAGGATGATACTCCCGATGCCGACGCCGAAGAGGAACAGAAAGAT
ACCCCCGACATGATCGAAGAGCTCATGATGGAGGCTGTAGAAACCGAGCTTCCGGATAATATTTTGAATATCTCGCTCGC
ATCGAAAAAGAAAAGCCGCTCAGGAAGTCGTGGTGAGGCGCTGAACAACCGGCGAGGTCGTTTTGTTCGGGCTCAACCCG
GAGAGATGCGCAGTGGAAAGGTTGCGCTTATTCCTACGCTTATTTCTGCGGCTCCGTGGCAGGAGACACGGCGTCGGGAT
AAAAAAATGGCAGGCCGTCCGAAAACCGCCCTGATCATCACCAAGGATGATGTAAAGATCAAGCGGTTCCGTGACAAATC
CGGTACGCTTTTCATATTTATGGTTGATGCTTCAGGATCAATGGCTTTAAACCGTATGCGTCAGGCCAAGGGAGCGGTTG
CAAGCCTTCTGCAGAATGCCTATGTGCATCGTGACCAGGTTGCCCTGATCTCGTTCAGAGGCAAGCAGGCTCAGGTGCTG
CTGCCTCCGTCCCAGAGCGTTGATCGTGCCAAGCGGGAGCTTGATGTTCTGCCTACAGGTGGCGGAACACCGCTTGCTTC
AGCGCTTTTTCTCGGCTGGGAAACTGCCAAGCAGGCACGCACAAAAGGAATAACCCAGGTGATGTTTGTCTTGATCACTG
ACGGCAGGGGCAATATAGGGTTGCAGGCAGCCTTCGATCCGAATGCCGAAAAAGCTCCCAAGGAGCTGCTTGAAAAAGAG
ATTGAAGCGCTTTCGCTTTCCATTCAGGCTGACGGCGTAGCCGCTATCGTCATCGATACGCAGATGAACTATCTATCAAG
AGGTGAGGCGCCCAAGCTCGCCCAGCAGCTTGGCGGGCGTTATTTTTACCTTCCAAACGCAAAGGCAGATCAAATTGTTG
AGGCCGCTCTCAGCTTCTGA

Upstream 100 bases:

>100_bases
TTCGTCACCGTCTGCGCAAGGATCCTCTTGAAACTCTTGATGCGGGTGAAAAGATTGATCGTGAACTTGCAAAAGTACTG
GGAGAAGTGGAAGCAACAGT

Downstream 100 bases:

>100_bases
TTTTTCCGAACTTCCCGTTTTAAGAGTACAAAACGGGAAGTTCAGGAATTTATTTCCCCTTTCTGACATTAGATTGCTAC
TGTTGTGCTTTTCGTATAGC

Product: protoporphyrin IX magnesium-chelatase

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MIAFTDIVGMDLAKQALMLLAVDSSLGGVVIPSAVGSGKSTLARAFAGILPEDTPFVELPLNVTEDRLIGGVDLEATLAS
GVRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPASFMLVGTYDPTDGDVRMGLLDRVG
IIVPFTAQNDYRARKKIVTTVLGKRDEEDTRDELKMLAGLVQAAREQLKHVSITKEQVQALIQTALSLGVEGNRADIFTI
RAALASAALAQRSDVEDEDMKLAIKLVLIPRATRMPEREPAEDEMPPEQEPPPPDEEPEAEDESAQDDTPDADAEEEQKD
TPDMIEELMMEAVETELPDNILNISLASKKKSRSGSRGEALNNRRGRFVRAQPGEMRSGKVALIPTLISAAPWQETRRRD
KKMAGRPKTALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQVL
LPPSQSVDRAKRELDVLPTGGGTPLASALFLGWETAKQARTKGITQVMFVLITDGRGNIGLQAAFDPNAEKAPKELLEKE
IEALSLSIQADGVAAIVIDTQMNYLSRGEAPKLAQQLGGRYFYLPNAKADQIVEAALSF

Sequences:

>Translated_619_residues
MIAFTDIVGMDLAKQALMLLAVDSSLGGVVIPSAVGSGKSTLARAFAGILPEDTPFVELPLNVTEDRLIGGVDLEATLAS
GVRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPASFMLVGTYDPTDGDVRMGLLDRVG
IIVPFTAQNDYRARKKIVTTVLGKRDEEDTRDELKMLAGLVQAAREQLKHVSITKEQVQALIQTALSLGVEGNRADIFTI
RAALASAALAQRSDVEDEDMKLAIKLVLIPRATRMPEREPAEDEMPPEQEPPPPDEEPEAEDESAQDDTPDADAEEEQKD
TPDMIEELMMEAVETELPDNILNISLASKKKSRSGSRGEALNNRRGRFVRAQPGEMRSGKVALIPTLISAAPWQETRRRD
KKMAGRPKTALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQVL
LPPSQSVDRAKRELDVLPTGGGTPLASALFLGWETAKQARTKGITQVMFVLITDGRGNIGLQAAFDPNAEKAPKELLEKE
IEALSLSIQADGVAAIVIDTQMNYLSRGEAPKLAQQLGGRYFYLPNAKADQIVEAALSF
>Mature_619_residues
MIAFTDIVGMDLAKQALMLLAVDSSLGGVVIPSAVGSGKSTLARAFAGILPEDTPFVELPLNVTEDRLIGGVDLEATLAS
GVRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPASFMLVGTYDPTDGDVRMGLLDRVG
IIVPFTAQNDYRARKKIVTTVLGKRDEEDTRDELKMLAGLVQAAREQLKHVSITKEQVQALIQTALSLGVEGNRADIFTI
RAALASAALAQRSDVEDEDMKLAIKLVLIPRATRMPEREPAEDEMPPEQEPPPPDEEPEAEDESAQDDTPDADAEEEQKD
TPDMIEELMMEAVETELPDNILNISLASKKKSRSGSRGEALNNRRGRFVRAQPGEMRSGKVALIPTLISAAPWQETRRRD
KKMAGRPKTALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQVL
LPPSQSVDRAKRELDVLPTGGGTPLASALFLGWETAKQARTKGITQVMFVLITDGRGNIGLQAAFDPNAEKAPKELLEKE
IEALSLSIQADGVAAIVIDTQMNYLSRGEAPKLAQQLGGRYFYLPNAKADQIVEAALSF

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 67160; Mature: 67160

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDSSLGGVVIPSAVGSGKSTLARAFAGILPEDTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGVRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPASFMLVGTYDPTDGDVRMGLLDRVGIIVPFTAQNDYRARKKIVTT
CCEEEEECCCCCCCCCEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCHHHHHHHHHH
VLGKRDEEDTRDELKMLAGLVQAAREQLKHVSITKEQVQALIQTALSLGVEGNRADIFTI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
RAALASAALAQRSDVEDEDMKLAIKLVLIPRATRMPEREPAEDEMPPEQEPPPPDEEPEA
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDESAQDDTPDADAEEEQKDTPDMIEELMMEAVETELPDNILNISLASKKKSRSGSRGEA
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCH
LNNRRGRFVRAQPGEMRSGKVALIPTLISAAPWQETRRRDKKMAGRPKTALIITKDDVKI
HHCCCCCEEECCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE
KRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQVL
EEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE
LPPSQSVDRAKRELDVLPTGGGTPLASALFLGWETAKQARTKGITQVMFVLITDGRGNIG
ECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCEE
LQAAFDPNAEKAPKELLEKEIEALSLSIQADGVAAIVIDTQMNYLSRGEAPKLAQQLGGR
EEEEECCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCHHHHHCCCCHHHHHHHCCE
YFYLPNAKADQIVEAALSF
EEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDSSLGGVVIPSAVGSGKSTLARAFAGILPEDTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGVRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPASFMLVGTYDPTDGDVRMGLLDRVGIIVPFTAQNDYRARKKIVTT
CCEEEEECCCCCCCCCEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCHHHHHHHHHH
VLGKRDEEDTRDELKMLAGLVQAAREQLKHVSITKEQVQALIQTALSLGVEGNRADIFTI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
RAALASAALAQRSDVEDEDMKLAIKLVLIPRATRMPEREPAEDEMPPEQEPPPPDEEPEA
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDESAQDDTPDADAEEEQKDTPDMIEELMMEAVETELPDNILNISLASKKKSRSGSRGEA
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCH
LNNRRGRFVRAQPGEMRSGKVALIPTLISAAPWQETRRRDKKMAGRPKTALIITKDDVKI
HHCCCCCEEECCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE
KRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQVL
EEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE
LPPSQSVDRAKRELDVLPTGGGTPLASALFLGWETAKQARTKGITQVMFVLITDGRGNIG
ECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEEECCCCCEE
LQAAFDPNAEKAPKELLEKEIEALSLSIQADGVAAIVIDTQMNYLSRGEAPKLAQQLGGR
EEEEECCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCHHHHHCCCCHHHHHHHCCE
YFYLPNAKADQIVEAALSF
EEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]