| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is yfjI [C]
Identifier: 119357425
GI number: 119357425
Start: 1845842
End: 1847218
Strand: Reverse
Name: yfjI [C]
Synonym: Cpha266_1624
Alternate gene names: 119357425
Gene position: 1847218-1845842 (Counterclockwise)
Preceding gene: 119357426
Following gene: 119357424
Centisome position: 58.94
GC content: 48.22
Gene sequence:
>1377_bases ATGAGTGATGTAAATGGTTCAATCGGGCCGCATGCTGTTCGGTTGCAGGAGGCGAGGATTAATAATATTGCTGTTCCTGT GTTCCCGCTTGAGGTTTTCCCTGATGCTGTACAGAAGTTGATCATGGATGCAGATGAGCGAATGCATTATGGAATCGAGT TTACGGGTTGTTCTCTGTTGTTTGCTGCTGCTTCGGCAATTGGAAATTCATGTGTGGTAGAGATGAATCCGGATTGGCAA GAGGGTGTCACGTTATGGCTGGTTTTGGTAGGCCATCCGGGAACAGGTAAGGGTCATGCTCTGAAGAGGACTCTAAAATC AATCGAACGGCAGGATTCTCAGCGGTATAGCTTGTACCTGGAGGATATGCAAGCCTATAAAAAGGCATTGACGAAGTTCC AGAGAGAGAAAAAAAACAATCCGGGCGAAAGTAGCGAAGAACCTCAAGCACCGATTCTCAAAAAAACAATCCTTTCGGAT ACAACACCTGAAAAAATGGCGCGGGTACATGCGGACAATCCGAGAGGAATCTGCCTGCATGTGGATGAGTTGGCTGGGTG GCTGCAAACGTTTAACCGATATAACACAAGCAATGCGCAAAAGACCTTCAATTCATCATGGAGCCGACAGGCTATCGTGA TTGACCGTGTGCATTCGGGTTCGATCAGGATTGAGGTTCCGTGTATTATGGTAGGCGGAACCATCCAGCCGAAAATACTT TCCGAATTGATGGCTGAACGTCGGGGAGATGATGGGTTCACCCATCGACTGCTTTTTTCCTATCCAGCATCGAAGGCTCG GGCATGGAATAGAGACGCAATTGACCAGAGCATGTTCACAGAATGGGATCAAGCCATGAGACGATTGCTTGAGCTGCCTT ACGAGAACGGAGAAAGCTTCGTCAAGACGGTTCTACGCTTCTCCCCGGACGCATGGGCATTATTGCATGACTGGCAGAAC CTTCTGGTTCAGGAGAGCAACCGGGAACGACGGAGCTATATAAAGGGAGTTTCTGCCAAAATCGAGCAATATGCGATCCG CTTTTCACTCATCATACAGATGATCAGGTATGCGTACCGGGAGGATAGCAAGGATAAGGTCGGTATTGAAGCGGTAGGAG CTGCGATCAAGCTGGCCGAATACTTCAGAAAAAGCCACCAGCAGATCATCGAAGAGATCGACAGTCATTCCCCACTGGAT GACCTGGCCGAGGACAAGCTTGCTGTTTATGATGCTTTGCCTGAAGAGTTCAAGCGCTCGGAGGGCATCCCGATAGCGTT CAGTAAAGGCATGAAGGAGAGAACTGCCGATAGGTTTATCAAGGATACGAGGTATTTCAGAAAAAAGAGTCAAGGGATGT ATGCAAAATTGCTCTGA
Upstream 100 bases:
>100_bases ATGCTGGTCGAAAGACTGAGTAAGGGGTTGTGGAACGAACAGGTGGAGGAATAAAGCATGCCCGGAGTACAAAAGCCTTG CTGTGGAGGAGGGGCGCTCT
Downstream 100 bases:
>100_bases GTGCTGGCAAAAGCGGCAATACTGGCAAATTCAAAAGGAAGTTATTGTTTTGCATGGAGATGTGATTACAAAACCTTGCC AATATTTTGCCAGTTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSDVNGSIGPHAVRLQEARINNIAVPVFPLEVFPDAVQKLIMDADERMHYGIEFTGCSLLFAAASAIGNSCVVEMNPDWQ EGVTLWLVLVGHPGTGKGHALKRTLKSIERQDSQRYSLYLEDMQAYKKALTKFQREKKNNPGESSEEPQAPILKKTILSD TTPEKMARVHADNPRGICLHVDELAGWLQTFNRYNTSNAQKTFNSSWSRQAIVIDRVHSGSIRIEVPCIMVGGTIQPKIL SELMAERRGDDGFTHRLLFSYPASKARAWNRDAIDQSMFTEWDQAMRRLLELPYENGESFVKTVLRFSPDAWALLHDWQN LLVQESNRERRSYIKGVSAKIEQYAIRFSLIIQMIRYAYREDSKDKVGIEAVGAAIKLAEYFRKSHQQIIEEIDSHSPLD DLAEDKLAVYDALPEEFKRSEGIPIAFSKGMKERTADRFIKDTRYFRKKSQGMYAKLL
Sequences:
>Translated_458_residues MSDVNGSIGPHAVRLQEARINNIAVPVFPLEVFPDAVQKLIMDADERMHYGIEFTGCSLLFAAASAIGNSCVVEMNPDWQ EGVTLWLVLVGHPGTGKGHALKRTLKSIERQDSQRYSLYLEDMQAYKKALTKFQREKKNNPGESSEEPQAPILKKTILSD TTPEKMARVHADNPRGICLHVDELAGWLQTFNRYNTSNAQKTFNSSWSRQAIVIDRVHSGSIRIEVPCIMVGGTIQPKIL SELMAERRGDDGFTHRLLFSYPASKARAWNRDAIDQSMFTEWDQAMRRLLELPYENGESFVKTVLRFSPDAWALLHDWQN LLVQESNRERRSYIKGVSAKIEQYAIRFSLIIQMIRYAYREDSKDKVGIEAVGAAIKLAEYFRKSHQQIIEEIDSHSPLD DLAEDKLAVYDALPEEFKRSEGIPIAFSKGMKERTADRFIKDTRYFRKKSQGMYAKLL >Mature_457_residues SDVNGSIGPHAVRLQEARINNIAVPVFPLEVFPDAVQKLIMDADERMHYGIEFTGCSLLFAAASAIGNSCVVEMNPDWQE GVTLWLVLVGHPGTGKGHALKRTLKSIERQDSQRYSLYLEDMQAYKKALTKFQREKKNNPGESSEEPQAPILKKTILSDT TPEKMARVHADNPRGICLHVDELAGWLQTFNRYNTSNAQKTFNSSWSRQAIVIDRVHSGSIRIEVPCIMVGGTIQPKILS ELMAERRGDDGFTHRLLFSYPASKARAWNRDAIDQSMFTEWDQAMRRLLELPYENGESFVKTVLRFSPDAWALLHDWQNL LVQESNRERRSYIKGVSAKIEQYAIRFSLIIQMIRYAYREDSKDKVGIEAVGAAIKLAEYFRKSHQQIIEEIDSHSPLDD LAEDKLAVYDALPEEFKRSEGIPIAFSKGMKERTADRFIKDTRYFRKKSQGMYAKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52268; Mature: 52137
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVNGSIGPHAVRLQEARINNIAVPVFPLEVFPDAVQKLIMDADERMHYGIEFTGCSLL CCCCCCCCCCCCEEEHHHHHCCEEEEEEEHHHHHHHHHHHHHCCHHHHHCCEEECHHHHH FAAASAIGNSCVVEMNPDWQEGVTLWLVLVGHPGTGKGHALKRTLKSIERQDSQRYSLYL HHHHHHCCCCEEEEECCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHH EDMQAYKKALTKFQREKKNNPGESSEEPQAPILKKTILSDTTPEKMARVHADNPRGICLH HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDELAGWLQTFNRYNTSNAQKTFNSSWSRQAIVIDRVHSGSIRIEVPCIMVGGTIQPKIL HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHH SELMAERRGDDGFTHRLLFSYPASKARAWNRDAIDQSMFTEWDQAMRRLLELPYENGESF HHHHHHHCCCCCHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VKTVLRFSPDAWALLHDWQNLLVQESNRERRSYIKGVSAKIEQYAIRFSLIIQMIRYAYR HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDSKDKVGIEAVGAAIKLAEYFRKSHQQIIEEIDSHSPLDDLAEDKLAVYDALPEEFKRS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHC EGIPIAFSKGMKERTADRFIKDTRYFRKKSQGMYAKLL CCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure SDVNGSIGPHAVRLQEARINNIAVPVFPLEVFPDAVQKLIMDADERMHYGIEFTGCSLL CCCCCCCCCCCEEEHHHHHCCEEEEEEEHHHHHHHHHHHHHCCHHHHHCCEEECHHHHH FAAASAIGNSCVVEMNPDWQEGVTLWLVLVGHPGTGKGHALKRTLKSIERQDSQRYSLYL HHHHHHCCCCEEEEECCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHH EDMQAYKKALTKFQREKKNNPGESSEEPQAPILKKTILSDTTPEKMARVHADNPRGICLH HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDELAGWLQTFNRYNTSNAQKTFNSSWSRQAIVIDRVHSGSIRIEVPCIMVGGTIQPKIL HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHH SELMAERRGDDGFTHRLLFSYPASKARAWNRDAIDQSMFTEWDQAMRRLLELPYENGESF HHHHHHHCCCCCHHHHHHEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VKTVLRFSPDAWALLHDWQNLLVQESNRERRSYIKGVSAKIEQYAIRFSLIIQMIRYAYR HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDSKDKVGIEAVGAAIKLAEYFRKSHQQIIEEIDSHSPLDDLAEDKLAVYDALPEEFKRS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHC EGIPIAFSKGMKERTADRFIKDTRYFRKKSQGMYAKLL CCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA