| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357401
Identifier: 119357401
GI number: 119357401
Start: 1815258
End: 1816637
Strand: Reverse
Name: 119357401
Synonym: Cpha266_1600
Alternate gene names: NA
Gene position: 1816637-1815258 (Counterclockwise)
Preceding gene: 119357402
Following gene: 119357400
Centisome position: 57.97
GC content: 57.61
Gene sequence:
>1380_bases ATGGCTGGGGTTGTGAAGGGTAAGCGGGTTGAGCTGGATGAGGTGCATCGGTTGTATCGGGCGAATAGCGCTGAGTGGGA GTTTTTTCGGCAGGCGTATCTGGGTGGCAGGGAGTGGGAGGAGGCTTCTTTGCTGTACAAGTATCTGAATGAGTCGGCTC CACAGTTGCGGGAGCGGTTGCGACAGACTCCGCTGGAGAATCATTGCAAGTCGGTGGTGCATACGTATAGCGGGTTTATG TGGCGGAATCCTCCGAAGCGGAGTTTTGGGGCGCTGGAGGCGAATAAGGCGTTGCTGGCGCTTGATGGGAATGCTGATAA GGAGGGCGCGTCGCTGAATGAGTTTATGAAGAGTGTGGCGTTGTGGGCGTCGGTGTTTGGGTGTTCGTGGGTGGTGCTGG ATAAGCCTGCGTCGAGGGCGGTGACGAAGGCGGATGAGCTGGAGGGTGATATCCGGCCGTATCTGAAGCTGTATTTTCCG GTTCATGTGCTGAACTGGAAGTTCGAGGAGACGGGGTCAGGGAGTTTTGAGCTGGTGTATTTGAAGGTTCGTGAGCGGAT CGATGATGGGTCGGCGGATGGCTGGGTGTATAGGATATGGAGCCGGGAGCGGGTTGAGGTGTGGCGCGTTGAGGGGAAGG GTGAGCCGGTGCTGGTGCGGGATGAGGTGAATGCCGTTGGTATGGTTCCTGCTGTGGTGCATTATAATACGAAGCCGCTG GAGCGTGGGGTTGCGGTGAGTGATTTGCAGGATGTGGCGCGGATGCAGCGGTCGTTGTATAATGATTTGTCGGAGCTGGG GCAGATGATTCGGGGGTCGAATCATAAGACGCTGGTGAAGAATCGGGGGGATGATGCTTCGACGGGTGCGGGTGGAGTGA TTATTATGCATGAGGATACGTTGCCGGAGAAGCGGCCGTATCTGCTGCAGGCGGATGCTGAGGCGCTGATTGGGCTTTTG GATGCGATGGAGAAGAAGGTGGAGATGATTAACCGGATGGCGCATTTGACGCCGGTTCGGTCGTTCCGGAAGGTGATTGT GTCGGCGGTGGCGATTGAGACGGAGTTTCAGATTCTGAATACGTTGCTTGCGGAGAAGGCTGCTCAGCTGGAGGTTACGG AGAATCAGCTGTTCAGGATTTTCTGCCGGTGGGAGGGGGTTGATTATGCTACGGCTGAGGTTGTGGTGACGTATCCGAAG CGGTTCGAGTTGCGGGATCGGAAGGCTGACCTGGAGTTTCTGGATAAGGCGCTCTCGGTGGCGGAGCGGATCGGGTCGGC GACGTTGCGGAGGGAGCTGGAGCGGCAGGTGGCGCGGGTTGTGCTTGAGCGTGATGATGTGCTGGAGGTGGTTGAGGCGG AGCTGGCTGGGGGTGGCTGA
Upstream 100 bases:
>100_bases GGAGCGGGATTATTGGCGGCAGCCGGAGCATTGGAGGGCTTAGGGTAGTGCTGAGTTCTGAGTGTAGAGATGTGTTTGGT AATGTTTTGATGGAGGTGTT
Downstream 100 bases:
>100_bases GGCTGAGCGGGTGAGTGAATTATTTTTTTTGTGTAAAGTTGGCGCAGGAATTCAAATCATTGGCATAAAAAACATTGATG GTATATTTGGTGGTATATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MAGVVKGKRVELDEVHRLYRANSAEWEFFRQAYLGGREWEEASLLYKYLNESAPQLRERLRQTPLENHCKSVVHTYSGFM WRNPPKRSFGALEANKALLALDGNADKEGASLNEFMKSVALWASVFGCSWVVLDKPASRAVTKADELEGDIRPYLKLYFP VHVLNWKFEETGSGSFELVYLKVRERIDDGSADGWVYRIWSRERVEVWRVEGKGEPVLVRDEVNAVGMVPAVVHYNTKPL ERGVAVSDLQDVARMQRSLYNDLSELGQMIRGSNHKTLVKNRGDDASTGAGGVIIMHEDTLPEKRPYLLQADAEALIGLL DAMEKKVEMINRMAHLTPVRSFRKVIVSAVAIETEFQILNTLLAEKAAQLEVTENQLFRIFCRWEGVDYATAEVVVTYPK RFELRDRKADLEFLDKALSVAERIGSATLRRELERQVARVVLERDDVLEVVEAELAGGG
Sequences:
>Translated_459_residues MAGVVKGKRVELDEVHRLYRANSAEWEFFRQAYLGGREWEEASLLYKYLNESAPQLRERLRQTPLENHCKSVVHTYSGFM WRNPPKRSFGALEANKALLALDGNADKEGASLNEFMKSVALWASVFGCSWVVLDKPASRAVTKADELEGDIRPYLKLYFP VHVLNWKFEETGSGSFELVYLKVRERIDDGSADGWVYRIWSRERVEVWRVEGKGEPVLVRDEVNAVGMVPAVVHYNTKPL ERGVAVSDLQDVARMQRSLYNDLSELGQMIRGSNHKTLVKNRGDDASTGAGGVIIMHEDTLPEKRPYLLQADAEALIGLL DAMEKKVEMINRMAHLTPVRSFRKVIVSAVAIETEFQILNTLLAEKAAQLEVTENQLFRIFCRWEGVDYATAEVVVTYPK RFELRDRKADLEFLDKALSVAERIGSATLRRELERQVARVVLERDDVLEVVEAELAGGG >Mature_458_residues AGVVKGKRVELDEVHRLYRANSAEWEFFRQAYLGGREWEEASLLYKYLNESAPQLRERLRQTPLENHCKSVVHTYSGFMW RNPPKRSFGALEANKALLALDGNADKEGASLNEFMKSVALWASVFGCSWVVLDKPASRAVTKADELEGDIRPYLKLYFPV HVLNWKFEETGSGSFELVYLKVRERIDDGSADGWVYRIWSRERVEVWRVEGKGEPVLVRDEVNAVGMVPAVVHYNTKPLE RGVAVSDLQDVARMQRSLYNDLSELGQMIRGSNHKTLVKNRGDDASTGAGGVIIMHEDTLPEKRPYLLQADAEALIGLLD AMEKKVEMINRMAHLTPVRSFRKVIVSAVAIETEFQILNTLLAEKAAQLEVTENQLFRIFCRWEGVDYATAEVVVTYPKR FELRDRKADLEFLDKALSVAERIGSATLRRELERQVARVVLERDDVLEVVEAELAGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52074; Mature: 51943
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVVKGKRVELDEVHRLYRANSAEWEFFRQAYLGGREWEEASLLYKYLNESAPQLRERL CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH RQTPLENHCKSVVHTYSGFMWRNPPKRSFGALEANKALLALDGNADKEGASLNEFMKSVA HHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH LWASVFGCSWVVLDKPASRAVTKADELEGDIRPYLKLYFPVHVLNWKFEETGSGSFELVY HHHHHHCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHEEEHEEEEEECCCCCCCEEEEE LKVRERIDDGSADGWVYRIWSRERVEVWRVEGKGEPVLVRDEVNAVGMVPAVVHYNTKPL EEEHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHEECCCCHH ERGVAVSDLQDVARMQRSLYNDLSELGQMIRGSNHKTLVKNRGDDASTGAGGVIIMHEDT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEECCC LPEKRPYLLQADAEALIGLLDAMEKKVEMINRMAHLTPVRSFRKVIVSAVAIETEFQILN CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLAEKAAQLEVTENQLFRIFCRWEGVDYATAEVVVTYPKRFELRDRKADLEFLDKALSV HHHHHHHHHEEECHHHEEEEEEEECCCCEEEEEEEEECCCCCCCCHHCCCHHHHHHHHHH AERIGSATLRRELERQVARVVLERDDVLEVVEAELAGGG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure AGVVKGKRVELDEVHRLYRANSAEWEFFRQAYLGGREWEEASLLYKYLNESAPQLRERL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH RQTPLENHCKSVVHTYSGFMWRNPPKRSFGALEANKALLALDGNADKEGASLNEFMKSVA HHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH LWASVFGCSWVVLDKPASRAVTKADELEGDIRPYLKLYFPVHVLNWKFEETGSGSFELVY HHHHHHCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHEEEHEEEEEECCCCCCCEEEEE LKVRERIDDGSADGWVYRIWSRERVEVWRVEGKGEPVLVRDEVNAVGMVPAVVHYNTKPL EEEHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHEECCCCHH ERGVAVSDLQDVARMQRSLYNDLSELGQMIRGSNHKTLVKNRGDDASTGAGGVIIMHEDT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEECCC LPEKRPYLLQADAEALIGLLDAMEKKVEMINRMAHLTPVRSFRKVIVSAVAIETEFQILN CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLAEKAAQLEVTENQLFRIFCRWEGVDYATAEVVVTYPKRFELRDRKADLEFLDKALSV HHHHHHHHHEEECHHHEEEEEEEECCCCEEEEEEEEECCCCCCCCHHCCCHHHHHHHHHH AERIGSATLRRELERQVARVVLERDDVLEVVEAELAGGG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA