Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is htpX [H]

Identifier: 119357382

GI number: 119357382

Start: 1796058

End: 1796933

Strand: Reverse

Name: htpX [H]

Synonym: Cpha266_1580

Alternate gene names: 119357382

Gene position: 1796933-1796058 (Counterclockwise)

Preceding gene: 119357383

Following gene: 119357381

Centisome position: 57.34

GC content: 56.28

Gene sequence:

>876_bases
ATGAAACGGGTGGTTCTTTTTTTGTTTACCAACCTTGCGGTGATGCTGGTGTTGTCGGTCAGTGCCCGTGTTCTGGGCGT
AGACCGATTTTTGACCGGCAACGGTCTGGATATGGGCATGCTGCTTCTGTTTGCTGCTTTAATCGGTTTTGGCGGATCCT
TTATTTCTCTTCTGATGTCCAAAACCATGGCGAAATGGAGTACCGGCGCACGGGTTATCCAGCAACCCGCCAACCAGAAC
GAGGTATGGCTCGTTGATACCGTGAGTCAGCTTTCCAAAAAAGCCGGTTTGGCGATGCCCGAGGTGGCCATCTACGACGG
TGCTCCGAATGCCTTCGCCACAGGCCCCAGCAAGTCGAGATCGCTGGTGGCGGTCTCGACCGGACTGTTGCAGAGCATGG
ATCGAAAACAGGTGGAAGCCGTGTTGGCTCACGAGGTCGCCCACATCGATAACGGCGACATGGTTACCTTGACGCTGATA
CAGGGTGTGCTCAATACCTTCGTGATTTTTCTGTCGCGCGTCATTGCCTATGCTATTGACAGCTTTCTTCGCAGCGACGA
CGACGAGTCCGGCAGTCCGGGTATCGGCTACTGGATCAGCAGCATTATTTTTGAAATCATGTTCGGCATTCTGGCAAGCG
TCGTCGTCATGTACTTTTCTCGCAAGCGTGAGTATCGGGCCGACGCGGGAGCTGCTGTGCTGTTGGGCGACCGGCGCCCG
ATGATCGACGCCCTGCGAGCGCTGGGAGGTCTTCAGGCCGGCCAGTTGCCGAAGGAAATGGCTGCCAGCGGGATTGCGGG
TGGCGGTATGATGGCTCTTTTCAGCAGTCACCCGCCCCTTGAATCGCGGATTGCAGCGCTGGAATCGGCACGCTGA

Upstream 100 bases:

>100_bases
CTGAATTTCTTATTTATTCAGTGAGAATGGGGTGTATATCATGGCGAAGCGCCAGTCCCTGTAATGTATAACCGATCAAT
AATAACGGAGGAGGATCCGT

Downstream 100 bases:

>100_bases
GATTGATCCATAACATAACATAACAATGCCCCGCTCAAATCGCGGGGTTTTGGTATGTTGGTATACCAGGGGATGTGGTT
AAGCTCCCGGTTGATCACGC

Product: heat shock protein HtpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKRVVLFLFTNLAVMLVLSVSARVLGVDRFLTGNGLDMGMLLLFAALIGFGGSFISLLMSKTMAKWSTGARVIQQPANQN
EVWLVDTVSQLSKKAGLAMPEVAIYDGAPNAFATGPSKSRSLVAVSTGLLQSMDRKQVEAVLAHEVAHIDNGDMVTLTLI
QGVLNTFVIFLSRVIAYAIDSFLRSDDDESGSPGIGYWISSIIFEIMFGILASVVVMYFSRKREYRADAGAAVLLGDRRP
MIDALRALGGLQAGQLPKEMAASGIAGGGMMALFSSHPPLESRIAALESAR

Sequences:

>Translated_291_residues
MKRVVLFLFTNLAVMLVLSVSARVLGVDRFLTGNGLDMGMLLLFAALIGFGGSFISLLMSKTMAKWSTGARVIQQPANQN
EVWLVDTVSQLSKKAGLAMPEVAIYDGAPNAFATGPSKSRSLVAVSTGLLQSMDRKQVEAVLAHEVAHIDNGDMVTLTLI
QGVLNTFVIFLSRVIAYAIDSFLRSDDDESGSPGIGYWISSIIFEIMFGILASVVVMYFSRKREYRADAGAAVLLGDRRP
MIDALRALGGLQAGQLPKEMAASGIAGGGMMALFSSHPPLESRIAALESAR
>Mature_291_residues
MKRVVLFLFTNLAVMLVLSVSARVLGVDRFLTGNGLDMGMLLLFAALIGFGGSFISLLMSKTMAKWSTGARVIQQPANQN
EVWLVDTVSQLSKKAGLAMPEVAIYDGAPNAFATGPSKSRSLVAVSTGLLQSMDRKQVEAVLAHEVAHIDNGDMVTLTLI
QGVLNTFVIFLSRVIAYAIDSFLRSDDDESGSPGIGYWISSIIFEIMFGILASVVVMYFSRKREYRADAGAAVLLGDRRP
MIDALRALGGLQAGQLPKEMAASGIAGGGMMALFSSHPPLESRIAALESAR

Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI1788133, Length=297, Percent_Identity=50.1683501683502, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022919
- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.-

Molecular weight: Translated: 31122; Mature: 31122

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVVLFLFTNLAVMLVLSVSARVLGVDRFLTGNGLDMGMLLLFAALIGFGGSFISLLMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
KTMAKWSTGARVIQQPANQNEVWLVDTVSQLSKKAGLAMPEVAIYDGAPNAFATGPSKSR
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
SLVAVSTGLLQSMDRKQVEAVLAHEVAHIDNGDMVTLTLIQGVLNTFVIFLSRVIAYAID
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLRSDDDESGSPGIGYWISSIIFEIMFGILASVVVMYFSRKREYRADAGAAVLLGDRRP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
MIDALRALGGLQAGQLPKEMAASGIAGGGMMALFSSHPPLESRIAALESAR
HHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRVVLFLFTNLAVMLVLSVSARVLGVDRFLTGNGLDMGMLLLFAALIGFGGSFISLLMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
KTMAKWSTGARVIQQPANQNEVWLVDTVSQLSKKAGLAMPEVAIYDGAPNAFATGPSKSR
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
SLVAVSTGLLQSMDRKQVEAVLAHEVAHIDNGDMVTLTLIQGVLNTFVIFLSRVIAYAID
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLRSDDDESGSPGIGYWISSIIFEIMFGILASVVVMYFSRKREYRADAGAAVLLGDRRP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
MIDALRALGGLQAGQLPKEMAASGIAGGGMMALFSSHPPLESRIAALESAR
HHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA