| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357317
Identifier: 119357317
GI number: 119357317
Start: 1722677
End: 1723633
Strand: Reverse
Name: 119357317
Synonym: Cpha266_1515
Alternate gene names: NA
Gene position: 1723633-1722677 (Counterclockwise)
Preceding gene: 119357318
Following gene: 119357316
Centisome position: 55.0
GC content: 46.71
Gene sequence:
>957_bases ATGAAGAAAAAAGTTCTGTTTATTTGCGGATCGATGAACCAGACAACCCAGATGCACCAGATTGCAGGGTGTCTGCAGGA GTACGATCAATATTTTACTCCTTTTTTCAGTGACGGTCTGCTCGGCAAAGCAACTGACCTCGGGTTGCTGGAGTTTACCA TTATGGGTAAAAAACGCTCCCGGAAGGCTCTTGATTATCTGTTTGCCAACAATCTTAAAGTCGATATCGGCGGCGGTACT CATCATTATGACCTTATTGTGACCTGTACGGATCTGATTGTTCCCGGACACTTCAAGGCGAGAAAGATCGTCCTGGTACA GGAGGGGATGACTGAACCCGAGACAGCTTTTTTTCATCTGGCAAAACAGTACCGATGGGTACCACGGTGGATAGCAGGAA CCGCTATGACCGGTCTCAGCGATGCCTATGAGAAGTTCTGTGTGGCCAGCGAAGGGTATCGTGAACTCTTTATGCAGAAG GGTGTTGATCCCCGGAAAATCGAAGTAACAAGTATTCCGAACTTTGACAATTGCGAGGCATATCTGCGGAATGATTTTGA GCACAGGGACTATGTTCTTGTCTGTACATCCGACAATCGCGAAACCTTTGTGTACGAAAACAGGAAAAAAAACATCCTCA AGTATCGAGCAATGGCAGAAGGGCATCAACTGATTTTCAAGCTTCATCCGAATGAAAATACGGTGAGGGCAGTGCGTGAA ATCAATCAATATGCGCCGGACAGTCTTGTTTATACAGAAGGAAAAACCGAGGAGATGATTGCCAATTCGCGTATGCTTAT TGCACAGTTCTCTTCAACGATTTTTGTGGGATCAGCTTTGCAGAAGCCGGTTCATTGCGGTCTTGAGCCTGATCTGCTTC GAGCGCTGACTCCCTTGCAGAACAGGAGCGCGGCAAAAAAGATTGCCGATGTCTGCCGTCAGGTTATTGACGGATAA
Upstream 100 bases:
>100_bases GTCGTTTCAAGGAAATCGTATGGTATGGCCTGGGCTATCTGATTATGTTCATATCAGGGGTGCACCTTAATGATGCATCG AAGGTAAGCAACGAGTGACG
Downstream 100 bases:
>100_bases GGATTTTTCTGAATTATCTGGTTTTCATTCATGCATACGGTAGTGGTTATTCCTGCAAGAGGAGGCTCAAAGGGCCTTAA AGACAAGAACATCTATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKKKVLFICGSMNQTTQMHQIAGCLQEYDQYFTPFFSDGLLGKATDLGLLEFTIMGKKRSRKALDYLFANNLKVDIGGGT HHYDLIVTCTDLIVPGHFKARKIVLVQEGMTEPETAFFHLAKQYRWVPRWIAGTAMTGLSDAYEKFCVASEGYRELFMQK GVDPRKIEVTSIPNFDNCEAYLRNDFEHRDYVLVCTSDNRETFVYENRKKNILKYRAMAEGHQLIFKLHPNENTVRAVRE INQYAPDSLVYTEGKTEEMIANSRMLIAQFSSTIFVGSALQKPVHCGLEPDLLRALTPLQNRSAAKKIADVCRQVIDG
Sequences:
>Translated_318_residues MKKKVLFICGSMNQTTQMHQIAGCLQEYDQYFTPFFSDGLLGKATDLGLLEFTIMGKKRSRKALDYLFANNLKVDIGGGT HHYDLIVTCTDLIVPGHFKARKIVLVQEGMTEPETAFFHLAKQYRWVPRWIAGTAMTGLSDAYEKFCVASEGYRELFMQK GVDPRKIEVTSIPNFDNCEAYLRNDFEHRDYVLVCTSDNRETFVYENRKKNILKYRAMAEGHQLIFKLHPNENTVRAVRE INQYAPDSLVYTEGKTEEMIANSRMLIAQFSSTIFVGSALQKPVHCGLEPDLLRALTPLQNRSAAKKIADVCRQVIDG >Mature_318_residues MKKKVLFICGSMNQTTQMHQIAGCLQEYDQYFTPFFSDGLLGKATDLGLLEFTIMGKKRSRKALDYLFANNLKVDIGGGT HHYDLIVTCTDLIVPGHFKARKIVLVQEGMTEPETAFFHLAKQYRWVPRWIAGTAMTGLSDAYEKFCVASEGYRELFMQK GVDPRKIEVTSIPNFDNCEAYLRNDFEHRDYVLVCTSDNRETFVYENRKKNILKYRAMAEGHQLIFKLHPNENTVRAVRE INQYAPDSLVYTEGKTEEMIANSRMLIAQFSSTIFVGSALQKPVHCGLEPDLLRALTPLQNRSAAKKIADVCRQVIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36246; Mature: 36246
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVLFICGSMNQTTQMHQIAGCLQEYDQYFTPFFSDGLLGKATDLGLLEFTIMGKKRS CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEEECCHHH RKALDYLFANNLKVDIGGGTHHYDLIVTCTDLIVPGHFKARKIVLVQEGMTEPETAFFHL HHHHHHHHHCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHH AKQYRWVPRWIAGTAMTGLSDAYEKFCVASEGYRELFMQKGVDPRKIEVTSIPNFDNCEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHH YLRNDFEHRDYVLVCTSDNRETFVYENRKKNILKYRAMAEGHQLIFKLHPNENTVRAVRE HHHCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH INQYAPDSLVYTEGKTEEMIANSRMLIAQFSSTIFVGSALQKPVHCGLEPDLLRALTPLQ HHHHCCCCEEEECCCCHHHHHCCCEEEEECCCCEEECHHHCCCCCCCCCHHHHHHHCCCC NRSAAKKIADVCRQVIDG CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKVLFICGSMNQTTQMHQIAGCLQEYDQYFTPFFSDGLLGKATDLGLLEFTIMGKKRS CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEEECCHHH RKALDYLFANNLKVDIGGGTHHYDLIVTCTDLIVPGHFKARKIVLVQEGMTEPETAFFHL HHHHHHHHHCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHH AKQYRWVPRWIAGTAMTGLSDAYEKFCVASEGYRELFMQKGVDPRKIEVTSIPNFDNCEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHH YLRNDFEHRDYVLVCTSDNRETFVYENRKKNILKYRAMAEGHQLIFKLHPNENTVRAVRE HHHCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH INQYAPDSLVYTEGKTEEMIANSRMLIAQFSSTIFVGSALQKPVHCGLEPDLLRALTPLQ HHHHCCCCEEEECCCCHHHHHCCCEEEEECCCCEEECHHHCCCCCCCCCHHHHHHHCCCC NRSAAKKIADVCRQVIDG CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA