Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357308

Identifier: 119357308

GI number: 119357308

Start: 1707504

End: 1709024

Strand: Reverse

Name: 119357308

Synonym: Cpha266_1506

Alternate gene names: NA

Gene position: 1709024-1707504 (Counterclockwise)

Preceding gene: 119357309

Following gene: 119357307

Centisome position: 54.53

GC content: 53.65

Gene sequence:

>1521_bases
ATGACATTTTTCAGAAAAGTTTCGAAACTGATGCTGCTCGGAGCCCTTCCATGCTTCTCAGCTCCGGTTTATGCGGCAAC
GGACTCCAATCAGAGTCCCGATAACAATGCTGCCGTTAAAGCAGTTTATGAAGAGTGGGATCTGCCTGGTGACGAGAGCA
TGGGAATGGTCGGGCTTGGTGTCAGTCATGAGTTGAGTGATTACTTCAGTATGGGCATAGGTACCTGGATGGCCGTGCGT
GGAGAGAGAGGCGGGTTTATCACACTCGGTATCGACGGAACCCTGCACGTCCCGCTTACTGACCGGCTCGGTCTTGAATC
CGGTGTATTTGTCGGCGCAGGCGGCGGGAGGGGCGGTTACAACCTCAGCGGAGGCGGACTTATGCTGCGAACGCATGCCG
CACTTACCTGCCGGATCGGCAGCTGGGGCTCACTTGGAGCAGGCGTCAGTTATGTGGATTTTCCAAACAGCGGCTCAATT
TCATCAGTACAACCCTTTGTTTCGTTGTCGCTGCCGTTTTATTTCCCGGTGGAAGGGGGGATGGAACGCAATGCTGATCG
AATCTCTTCCCGGCAGGATCCTCCACGCAAACACTCTCTTGCAATCATAGGGCGAGACCTTCAGGTATCGTCATCCACCA
ATACCCTTTCGGGCGGCGATCAGGACAATCTGGCACTGCTCGGTATTGAGTGGCGGACCTATTTTGATGAAACCTGGTAT
GCCAAACTGGAAATGGAAGGAGCTGCAAGCAGGGGCAGTACGGGATATATGCAGATTCTCACAGGAGTCGGTGCCCGTCT
CCCTCTTTCCGATGATTTTTATGCCACTGCCGATATCTCTGTTGGCGGTGGAGGCGGGGGTGGTGTCGATACAGGAGGCG
GTCTCCTGTTCGACGCATCAGCCGGATTGCAGTTGTTCTTAACGGATAACTTTTTTGCCGGAGTTTCCGGCGGATACCTT
ACCTCTTTCTCTGGTGGCTTTGAATCCACAAGTATTGCTCTGAATCTTGGATATGAAGCAGGCAGAGGGCAAGACCGGAA
TCTTTCCCGTACTGCGGCAAAGGGTGACGATGCCGAATATCTCAGGGTTCGTCTGGTCAATCAGACCTATTTCAAAGCCG
ATGATCATTGGCGCACCCACCATGTCGATGAGGATATTCAGAACCTCGGAGTTCAGATCGATTATTTTCTCGATCGCAAC
TGGTATCTCAGTGGACAGGGTCTTGCCGCCTATGACGGCAATGCAGGAGCCTACATGACCGGTCTGCTCGGTGCCGGTAT
CAGGAAAAATATTACCGACCGTTTCTACCTCAATGTCGAGGCGCTTGCCGGCGCTGCCGGAGGAGGAGGAGTCGCAGTAG
GTTCAGGGCTGGTTTGGCAGGGCAATCTCGGGTTAGGATACGACATCACCCCCGCCATCTCCGTTATGGCCACAGCCGGA
AGGATGGAAGCTTTTGACGGCGATTTCAGAAGTAATGTGCTCGGCCTCTCACTGGGCTATAACTTCAACTCGCCGCTGTA
G

Upstream 100 bases:

>100_bases
TTGCTATGGTACAACTGCGGGGAGGTCTCGCTCTCCCTTCTTTGATTCTGATCGTCTCTCTTGTTGATTGGATTTCAGTT
GACACTCAAACAGCACTTCT

Downstream 100 bases:

>100_bases
TTTGTTTGGAGCTTTTCGTAACGCATAAAATATTCCGCTGCATTTGGTTTTTTGATGACTCAAGACTTGAACCAGACCTC
CGGGCAACTTGCTCGGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVR
GERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSI
SSVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY
AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYL
TSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRN
WYLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG
RMEAFDGDFRSNVLGLSLGYNFNSPL

Sequences:

>Translated_506_residues
MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVR
GERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSI
SSVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY
AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYL
TSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRN
WYLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG
RMEAFDGDFRSNVLGLSLGYNFNSPL
>Mature_505_residues
TFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVRG
ERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSIS
SVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWYA
KLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYLT
SFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNW
YLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAGR
MEAFDGDFRSNVLGLSLGYNFNSPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53440; Mature: 53309

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLG
CCHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEC
VSHELSDYFSMGIGTWMAVRGERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGY
CCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCEEEECCCCCCCC
NLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSISSVQPFVSLSLPFYFPVEGG
EECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCC
MERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY
CCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEE
AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDAS
EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC
AGLQLFLTDNFFAGVSGGYLTSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEY
CCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCEE
LRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNWYLSGQGLAAYDGNAGAYMT
EEEEEECCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCHHHH
GLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG
HHHCCCHHCCCCCEEEEEEHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHECCC
RMEAFDGDFRSNVLGLSLGYNFNSPL
CCCCCCCCHHCCEEEEEECCCCCCCC
>Mature Secondary Structure 
TFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLG
CHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEC
VSHELSDYFSMGIGTWMAVRGERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGY
CCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCEEEECCCCCCCC
NLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSISSVQPFVSLSLPFYFPVEGG
EECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCC
MERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY
CCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEE
AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDAS
EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC
AGLQLFLTDNFFAGVSGGYLTSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEY
CCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCEE
LRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNWYLSGQGLAAYDGNAGAYMT
EEEEEECCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCHHHH
GLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG
HHHCCCHHCCCCCEEEEEEHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHECCC
RMEAFDGDFRSNVLGLSLGYNFNSPL
CCCCCCCCHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA