| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357308
Identifier: 119357308
GI number: 119357308
Start: 1707504
End: 1709024
Strand: Reverse
Name: 119357308
Synonym: Cpha266_1506
Alternate gene names: NA
Gene position: 1709024-1707504 (Counterclockwise)
Preceding gene: 119357309
Following gene: 119357307
Centisome position: 54.53
GC content: 53.65
Gene sequence:
>1521_bases ATGACATTTTTCAGAAAAGTTTCGAAACTGATGCTGCTCGGAGCCCTTCCATGCTTCTCAGCTCCGGTTTATGCGGCAAC GGACTCCAATCAGAGTCCCGATAACAATGCTGCCGTTAAAGCAGTTTATGAAGAGTGGGATCTGCCTGGTGACGAGAGCA TGGGAATGGTCGGGCTTGGTGTCAGTCATGAGTTGAGTGATTACTTCAGTATGGGCATAGGTACCTGGATGGCCGTGCGT GGAGAGAGAGGCGGGTTTATCACACTCGGTATCGACGGAACCCTGCACGTCCCGCTTACTGACCGGCTCGGTCTTGAATC CGGTGTATTTGTCGGCGCAGGCGGCGGGAGGGGCGGTTACAACCTCAGCGGAGGCGGACTTATGCTGCGAACGCATGCCG CACTTACCTGCCGGATCGGCAGCTGGGGCTCACTTGGAGCAGGCGTCAGTTATGTGGATTTTCCAAACAGCGGCTCAATT TCATCAGTACAACCCTTTGTTTCGTTGTCGCTGCCGTTTTATTTCCCGGTGGAAGGGGGGATGGAACGCAATGCTGATCG AATCTCTTCCCGGCAGGATCCTCCACGCAAACACTCTCTTGCAATCATAGGGCGAGACCTTCAGGTATCGTCATCCACCA ATACCCTTTCGGGCGGCGATCAGGACAATCTGGCACTGCTCGGTATTGAGTGGCGGACCTATTTTGATGAAACCTGGTAT GCCAAACTGGAAATGGAAGGAGCTGCAAGCAGGGGCAGTACGGGATATATGCAGATTCTCACAGGAGTCGGTGCCCGTCT CCCTCTTTCCGATGATTTTTATGCCACTGCCGATATCTCTGTTGGCGGTGGAGGCGGGGGTGGTGTCGATACAGGAGGCG GTCTCCTGTTCGACGCATCAGCCGGATTGCAGTTGTTCTTAACGGATAACTTTTTTGCCGGAGTTTCCGGCGGATACCTT ACCTCTTTCTCTGGTGGCTTTGAATCCACAAGTATTGCTCTGAATCTTGGATATGAAGCAGGCAGAGGGCAAGACCGGAA TCTTTCCCGTACTGCGGCAAAGGGTGACGATGCCGAATATCTCAGGGTTCGTCTGGTCAATCAGACCTATTTCAAAGCCG ATGATCATTGGCGCACCCACCATGTCGATGAGGATATTCAGAACCTCGGAGTTCAGATCGATTATTTTCTCGATCGCAAC TGGTATCTCAGTGGACAGGGTCTTGCCGCCTATGACGGCAATGCAGGAGCCTACATGACCGGTCTGCTCGGTGCCGGTAT CAGGAAAAATATTACCGACCGTTTCTACCTCAATGTCGAGGCGCTTGCCGGCGCTGCCGGAGGAGGAGGAGTCGCAGTAG GTTCAGGGCTGGTTTGGCAGGGCAATCTCGGGTTAGGATACGACATCACCCCCGCCATCTCCGTTATGGCCACAGCCGGA AGGATGGAAGCTTTTGACGGCGATTTCAGAAGTAATGTGCTCGGCCTCTCACTGGGCTATAACTTCAACTCGCCGCTGTA G
Upstream 100 bases:
>100_bases TTGCTATGGTACAACTGCGGGGAGGTCTCGCTCTCCCTTCTTTGATTCTGATCGTCTCTCTTGTTGATTGGATTTCAGTT GACACTCAAACAGCACTTCT
Downstream 100 bases:
>100_bases TTTGTTTGGAGCTTTTCGTAACGCATAAAATATTCCGCTGCATTTGGTTTTTTGATGACTCAAGACTTGAACCAGACCTC CGGGCAACTTGCTCGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVR GERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSI SSVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYL TSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRN WYLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG RMEAFDGDFRSNVLGLSLGYNFNSPL
Sequences:
>Translated_506_residues MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVR GERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSI SSVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYL TSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRN WYLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG RMEAFDGDFRSNVLGLSLGYNFNSPL >Mature_505_residues TFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLGVSHELSDYFSMGIGTWMAVRG ERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGYNLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSIS SVQPFVSLSLPFYFPVEGGMERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWYA KLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDASAGLQLFLTDNFFAGVSGGYLT SFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEYLRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNW YLSGQGLAAYDGNAGAYMTGLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAGR MEAFDGDFRSNVLGLSLGYNFNSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53440; Mature: 53309
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLG CCHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEC VSHELSDYFSMGIGTWMAVRGERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGY CCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCEEEECCCCCCCC NLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSISSVQPFVSLSLPFYFPVEGG EECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCC MERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY CCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEE AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDAS EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC AGLQLFLTDNFFAGVSGGYLTSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEY CCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCEE LRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNWYLSGQGLAAYDGNAGAYMT EEEEEECCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCHHHH GLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG HHHCCCHHCCCCCEEEEEEHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHECCC RMEAFDGDFRSNVLGLSLGYNFNSPL CCCCCCCCHHCCEEEEEECCCCCCCC >Mature Secondary Structure TFFRKVSKLMLLGALPCFSAPVYAATDSNQSPDNNAAVKAVYEEWDLPGDESMGMVGLG CHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEC VSHELSDYFSMGIGTWMAVRGERGGFITLGIDGTLHVPLTDRLGLESGVFVGAGGGRGGY CCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCEEEECCCCCCCC NLSGGGLMLRTHAALTCRIGSWGSLGAGVSYVDFPNSGSISSVQPFVSLSLPFYFPVEGG EECCCCEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCC MERNADRISSRQDPPRKHSLAIIGRDLQVSSSTNTLSGGDQDNLALLGIEWRTYFDETWY CCCCHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEE AKLEMEGAASRGSTGYMQILTGVGARLPLSDDFYATADISVGGGGGGGVDTGGGLLFDAS EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC AGLQLFLTDNFFAGVSGGYLTSFSGGFESTSIALNLGYEAGRGQDRNLSRTAAKGDDAEY CCEEEEEECCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCEE LRVRLVNQTYFKADDHWRTHHVDEDIQNLGVQIDYFLDRNWYLSGQGLAAYDGNAGAYMT EEEEEECCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCHHHH GLLGAGIRKNITDRFYLNVEALAGAAGGGGVAVGSGLVWQGNLGLGYDITPAISVMATAG HHHCCCHHCCCCCEEEEEEHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHHHHECCC RMEAFDGDFRSNVLGLSLGYNFNSPL CCCCCCCCHHCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA