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The map label for this gene is salIR [H]

Identifier: 119357304

GI number: 119357304

Start: 1704041

End: 1704889

Strand: Reverse

Name: salIR [H]

Synonym: Cpha266_1502

Alternate gene names: 119357304

Gene position: 1704889-1704041 (Counterclockwise)

Preceding gene: 119357305

Following gene: 119357303

Centisome position: 54.4

GC content: 52.77

Gene sequence:

>849_bases
ATGCAGACAACGAGGGATGTCGAGTCCGCATTGCATGTCACAGGCAACATGACCGCAGTAACTCCCGCTGTCATTTGCGA
TCATCCCGATATTCTTCCGACACTTCGCATGTCCACCTGCCCTCCGCTTGCCGTTGACCGACTTATCGGACTTTCGGGTG
TTTCTTCAAATCTTGTGAAAAGTCTCGAGCTGAGAAAGAAGCTTCCCTCCAAAATGAATTCCGGATTGCTGGATGAGGAT
CTTCATCGGATAGCCGCTATTATCGTCAAGATGGCCGATCCGGATATTTTTGTCTGGCTTGGCCGGAAAACGCAACCGGA
TAACGATGAAATACACCGGGCGGCTACCATTGTCGCCGACCGTCTTTGCGGCGCGGTTGCCAATCCGATTATCCGTAATG
CCCAGGAGAAACGGCAGCTTGCAGCGATCAAGTCATGGCTTGAAGCTCGTGGTTACAGGCAGTTGCAAAATGGCGAGGCG
GTACGTTTTGACTCGATGCCTCCGGGTACGTTTACCTTTCGCATGAATGTGCCTGTCGATCTTGAGGGCGGCGTCAAACG
GGTGAACATACCGGTTGATGCCGTGGTCATGCCGGGGAAGTCGAAGAAAGGAGCCTTACCGGTTTTCTTCGAGGCGAAAT
CTACCGGGGACTTCACCAATACGAACAAGCGCCGTAAGGAAGAGGCCATGAAGATGAGCCAGCTTCGCAGCACATACGGG
AGGAACGTCCGGTTCAATCTTTTTCTGTGCGGTTATTTCGACAGCGGTTATCTTGGATATGAGGCCGCAGAAGGCATCGA
CTGGGTCTGGGAACATCGCATCGACGACATGGCGCTTTTCGGGATATGA

Upstream 100 bases:

>100_bases
CGATAAACCGGCGAGGTGGAAAGCCGACATTGCAAAATCGGTCGATATGTACAACGACTGGTTCATGACCTTTGCCCCGT
AAGCGTTCCGCTCGACACGC

Downstream 100 bases:

>100_bases
GCATGACGGTTTTACAGGATACATTCGAGGCGAACCGCCTCAGGCTGCAAAGCGAACTCGACGCCGGAAAGACTCAGGCT
GAACGCAACCGTCTCGGCCA

Product: Type II site-specific deoxyribonuclease

Products: NA

Alternate protein names: R.SalI; Endonuclease SalI; Type II restriction enzyme SalI [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQTTRDVESALHVTGNMTAVTPAVICDHPDILPTLRMSTCPPLAVDRLIGLSGVSSNLVKSLELRKKLPSKMNSGLLDED
LHRIAAIIVKMADPDIFVWLGRKTQPDNDEIHRAATIVADRLCGAVANPIIRNAQEKRQLAAIKSWLEARGYRQLQNGEA
VRFDSMPPGTFTFRMNVPVDLEGGVKRVNIPVDAVVMPGKSKKGALPVFFEAKSTGDFTNTNKRRKEEAMKMSQLRSTYG
RNVRFNLFLCGYFDSGYLGYEAAEGIDWVWEHRIDDMALFGI

Sequences:

>Translated_282_residues
MQTTRDVESALHVTGNMTAVTPAVICDHPDILPTLRMSTCPPLAVDRLIGLSGVSSNLVKSLELRKKLPSKMNSGLLDED
LHRIAAIIVKMADPDIFVWLGRKTQPDNDEIHRAATIVADRLCGAVANPIIRNAQEKRQLAAIKSWLEARGYRQLQNGEA
VRFDSMPPGTFTFRMNVPVDLEGGVKRVNIPVDAVVMPGKSKKGALPVFFEAKSTGDFTNTNKRRKEEAMKMSQLRSTYG
RNVRFNLFLCGYFDSGYLGYEAAEGIDWVWEHRIDDMALFGI
>Mature_282_residues
MQTTRDVESALHVTGNMTAVTPAVICDHPDILPTLRMSTCPPLAVDRLIGLSGVSSNLVKSLELRKKLPSKMNSGLLDED
LHRIAAIIVKMADPDIFVWLGRKTQPDNDEIHRAATIVADRLCGAVANPIIRNAQEKRQLAAIKSWLEARGYRQLQNGEA
VRFDSMPPGTFTFRMNVPVDLEGGVKRVNIPVDAVVMPGKSKKGALPVFFEAKSTGDFTNTNKRRKEEAMKMSQLRSTYG
RNVRFNLFLCGYFDSGYLGYEAAEGIDWVWEHRIDDMALFGI

Specific function: Recognizes the double-stranded sequence GTCGAC and cleaves after G-1 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019072 [H]

Pfam domain/function: PF09572 RE_XamI [H]

EC number: =3.1.21.4 [H]

Molecular weight: Translated: 31392; Mature: 31392

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTRDVESALHVTGNMTAVTPAVICDHPDILPTLRMSTCPPLAVDRLIGLSGVSSNLVK
CCCHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHH
SLELRKKLPSKMNSGLLDEDLHRIAAIIVKMADPDIFVWLGRKTQPDNDEIHRAATIVAD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RLCGAVANPIIRNAQEKRQLAAIKSWLEARGYRQLQNGEAVRFDSMPPGTFTFRMNVPVD
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCEEEEEEECCEE
LEGGVKRVNIPVDAVVMPGKSKKGALPVFFEAKSTGDFTNTNKRRKEEAMKMSQLRSTYG
CCCCEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
RNVRFNLFLCGYFDSGYLGYEAAEGIDWVWEHRIDDMALFGI
CCEEEEEEEEEEECCCCCCCHHHCCCHHHHHHCCCCEEECCC
>Mature Secondary Structure
MQTTRDVESALHVTGNMTAVTPAVICDHPDILPTLRMSTCPPLAVDRLIGLSGVSSNLVK
CCCHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHH
SLELRKKLPSKMNSGLLDEDLHRIAAIIVKMADPDIFVWLGRKTQPDNDEIHRAATIVAD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RLCGAVANPIIRNAQEKRQLAAIKSWLEARGYRQLQNGEAVRFDSMPPGTFTFRMNVPVD
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCEEEEEEECCEE
LEGGVKRVNIPVDAVVMPGKSKKGALPVFFEAKSTGDFTNTNKRRKEEAMKMSQLRSTYG
CCCCEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
RNVRFNLFLCGYFDSGYLGYEAAEGIDWVWEHRIDDMALFGI
CCEEEEEEEEEEECCCCCCCHHHCCCHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7828868 [H]