| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357301
Identifier: 119357301
GI number: 119357301
Start: 1701458
End: 1702252
Strand: Reverse
Name: 119357301
Synonym: Cpha266_1499
Alternate gene names: NA
Gene position: 1702252-1701458 (Counterclockwise)
Preceding gene: 119357302
Following gene: 119357300
Centisome position: 54.32
GC content: 55.72
Gene sequence:
>795_bases ATGGGTTATTATTCAAAAGGCCTCGGTTTTATTGTTCACTCGCCCTGCGGAGGAGTGAACGTGGCCGCGAATCGGACATC CATCTGTCCGCCTGCAGGCGGGCGAACAAGAGGCTGGAGCAGACACTCCGCGTCGTCAAATAAATTTTCCGTCGCGGAGC GTTGCTCATCCGCGGCCACGTTAGCCGTATCAATCATGATGACTCTGCGTGAGATAGTTGCCGATTACATCCGTTACTGC CGAGCCGACGCAGAACAAGAGCAACGGTGGTTTGCCATTCAACGTACGCTCCAAGAAGCCGTATCGCACGCAGCACTTGC AGTAAGCCCAAGTGGCAAGCGTCTCTCCCACCAGCGAAGAATTCCTCAGTCCGTTCTTGCGGAAAGCGGCCGCCGCTTGT TCGTGTCTTTGCCAGCGCTTTCCAAAGCCAAATCATTCGAGGAGCTCCACGAAACGGTAGAGGCACTAATCGGGCAAATT CCGGGCATCGGTGAACTGACCATCTATGACACCGCTCTTCGCATTGGTGCGCATTTGCGGCTTGAGCCGACAGTTGTTTT TCTTCACGCTGGTACTCGTGTGGGCGCGCGTCGTCTCGGGTTGTCCGTGTCGTGTGCATCCATACCAGTATCGGAGTTTC CTCACGCCTTTCAGAAACTCAAGCCGCGAGAGATCGAGGACGTCTTGTGCAGATACAAAAGTGAGTTGGGCAACGAGGGA AATCCTCCCTCTTCACGGCGCGGGTGCTACGATAGGGCTAACCCTGAAATGCACCGGACCTGCGCGGGTCGGTGA
Upstream 100 bases:
>100_bases TTGGAGTTGCGGTGGTGATGGTTGCTGGTGGAGTTTTTGTGGGGAGAGCAGGGGGGAAGAATAAACAGGTTTCCTGAAAA ATCCGTATCATTAACGTGAT
Downstream 100 bases:
>100_bases TTTTTAACATAGGGGTATATCAATCAGAATGGCAAAGAAATCTGGCGTATACAAGAACGATCCGGGACGCTGATCCGTAT CATAAAAACCCTTTCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MGYYSKGLGFIVHSPCGGVNVAANRTSICPPAGGRTRGWSRHSASSNKFSVAERCSSAATLAVSIMMTLREIVADYIRYC RADAEQEQRWFAIQRTLQEAVSHAALAVSPSGKRLSHQRRIPQSVLAESGRRLFVSLPALSKAKSFEELHETVEALIGQI PGIGELTIYDTALRIGAHLRLEPTVVFLHAGTRVGARRLGLSVSCASIPVSEFPHAFQKLKPREIEDVLCRYKSELGNEG NPPSSRRGCYDRANPEMHRTCAGR
Sequences:
>Translated_264_residues MGYYSKGLGFIVHSPCGGVNVAANRTSICPPAGGRTRGWSRHSASSNKFSVAERCSSAATLAVSIMMTLREIVADYIRYC RADAEQEQRWFAIQRTLQEAVSHAALAVSPSGKRLSHQRRIPQSVLAESGRRLFVSLPALSKAKSFEELHETVEALIGQI PGIGELTIYDTALRIGAHLRLEPTVVFLHAGTRVGARRLGLSVSCASIPVSEFPHAFQKLKPREIEDVLCRYKSELGNEG NPPSSRRGCYDRANPEMHRTCAGR >Mature_263_residues GYYSKGLGFIVHSPCGGVNVAANRTSICPPAGGRTRGWSRHSASSNKFSVAERCSSAATLAVSIMMTLREIVADYIRYCR ADAEQEQRWFAIQRTLQEAVSHAALAVSPSGKRLSHQRRIPQSVLAESGRRLFVSLPALSKAKSFEELHETVEALIGQIP GIGELTIYDTALRIGAHLRLEPTVVFLHAGTRVGARRLGLSVSCASIPVSEFPHAFQKLKPREIEDVLCRYKSELGNEGN PPSSRRGCYDRANPEMHRTCAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28916; Mature: 28785
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYYSKGLGFIVHSPCGGVNVAANRTSICPPAGGRTRGWSRHSASSNKFSVAERCSSAAT CCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LAVSIMMTLREIVADYIRYCRADAEQEQRWFAIQRTLQEAVSHAALAVSPSGKRLSHQRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHC IPQSVLAESGRRLFVSLPALSKAKSFEELHETVEALIGQIPGIGELTIYDTALRIGAHLR CCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEE LEPTVVFLHAGTRVGARRLGLSVSCASIPVSEFPHAFQKLKPREIEDVLCRYKSELGNEG ECCEEEEEECCCHHHHHHHCCEEEHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC NPPSSRRGCYDRANPEMHRTCAGR CCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure GYYSKGLGFIVHSPCGGVNVAANRTSICPPAGGRTRGWSRHSASSNKFSVAERCSSAAT CCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LAVSIMMTLREIVADYIRYCRADAEQEQRWFAIQRTLQEAVSHAALAVSPSGKRLSHQRR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHC IPQSVLAESGRRLFVSLPALSKAKSFEELHETVEALIGQIPGIGELTIYDTALRIGAHLR CCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEE LEPTVVFLHAGTRVGARRLGLSVSCASIPVSEFPHAFQKLKPREIEDVLCRYKSELGNEG ECCEEEEEECCCHHHHHHHCCEEEHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC NPPSSRRGCYDRANPEMHRTCAGR CCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA