| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357275
Identifier: 119357275
GI number: 119357275
Start: 1667073
End: 1667507
Strand: Reverse
Name: 119357275
Synonym: Cpha266_1467
Alternate gene names: NA
Gene position: 1667507-1667073 (Counterclockwise)
Preceding gene: 119357276
Following gene: 119357274
Centisome position: 53.21
GC content: 55.63
Gene sequence:
>435_bases ATGTCTGCATTCAAAATCCTTCTTCTCCTCGTTGTTTCGCTTCTTTGTGCCATACCGCTTCGTGCTGAAGAGCCCCTGCA GCAAACCGGAGAAAAGCTTGTCAGGCAGCTCTTTGCCGACATGAAGTCTGCAAACATCCCTGCGATCAAAAAGATCATCT CCCCGGTGTTCCAGTCCGTGCACCAGGACGGCACCCGCAACTGTGACCAGCAGATCGAGCTGATCAAGGGACTCGATATG GCACCCCCGGTACTGGGCGATTTTGTTGAAACCCGCAACGGCAGTATCCTCGTTGTAACCTATATGGTGAGCGTGGAGGA ATCCGTCGGCGGCAAGCGGCTGACCGGAAAGCCTGCGCGCAGGCTTTCCGTCTTCCAGGATACCTCCGAAGGGTGGCGCT GGGTCGCGCATGCGAACCTTCAGGTTATGCAATGA
Upstream 100 bases:
>100_bases CCCGGCTCTTGCGCCCGGAAGCATATCTGCATCCATCGGATTATTTTTTGTAATTTCACCTGTCGGGACTTTTTTTCAAC AACCATTGCAGGAGGCCCCT
Downstream 100 bases:
>100_bases GCGTTTTTTTTATACCCGACGAATATCCATCGATTGATGAAATAGCACGAGCGATTTGTCAGCACTATCATGCAGTATTC CGAAAGCTTCTTGATACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSAFKILLLLVVSLLCAIPLRAEEPLQQTGEKLVRQLFADMKSANIPAIKKIISPVFQSVHQDGTRNCDQQIELIKGLDM APPVLGDFVETRNGSILVVTYMVSVEESVGGKRLTGKPARRLSVFQDTSEGWRWVAHANLQVMQ
Sequences:
>Translated_144_residues MSAFKILLLLVVSLLCAIPLRAEEPLQQTGEKLVRQLFADMKSANIPAIKKIISPVFQSVHQDGTRNCDQQIELIKGLDM APPVLGDFVETRNGSILVVTYMVSVEESVGGKRLTGKPARRLSVFQDTSEGWRWVAHANLQVMQ >Mature_143_residues SAFKILLLLVVSLLCAIPLRAEEPLQQTGEKLVRQLFADMKSANIPAIKKIISPVFQSVHQDGTRNCDQQIELIKGLDMA PPVLGDFVETRNGSILVVTYMVSVEESVGGKRLTGKPARRLSVFQDTSEGWRWVAHANLQVMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15973; Mature: 15842
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFKILLLLVVSLLCAIPLRAEEPLQQTGEKLVRQLFADMKSANIPAIKKIISPVFQSV CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HQDGTRNCDQQIELIKGLDMAPPVLGDFVETRNGSILVVTYMVSVEESVGGKRLTGKPAR HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCCCHHH RLSVFQDTSEGWRWVAHANLQVMQ HHHHHHCCCCHHEEEEECCEEECC >Mature Secondary Structure SAFKILLLLVVSLLCAIPLRAEEPLQQTGEKLVRQLFADMKSANIPAIKKIISPVFQSV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HQDGTRNCDQQIELIKGLDMAPPVLGDFVETRNGSILVVTYMVSVEESVGGKRLTGKPAR HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCCCHHH RLSVFQDTSEGWRWVAHANLQVMQ HHHHHHCCCCHHEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA