| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357256
Identifier: 119357256
GI number: 119357256
Start: 1651774
End: 1652241
Strand: Reverse
Name: 119357256
Synonym: Cpha266_1448
Alternate gene names: NA
Gene position: 1652241-1651774 (Counterclockwise)
Preceding gene: 119357259
Following gene: 119357255
Centisome position: 52.72
GC content: 41.88
Gene sequence:
>468_bases ATGGCTGTTGGACTGAAATCAAGTAAAACCAGTACGATTGGGCCTGTTTCTTTGAAATGGATACCCTCTGATTTCCCATC AAGAGTTGATGTGCAAGGTGCTTCAGGTTATGTTGGTGCTCTATCACGGACTCATGTTCCCACAGGCATTGCATTGTCAT CAAGAATCAAGTATGTGCTTGATAAAACCTTTGGTATCGATCCAAATTCATCGAAGGTTCTTACGATTACTGTAATTGAG GCAAAAAGCACATTCAGCTATGGATTTTCCTCTGCTCGTCTGAGTTCAGGCAAATGCCATCTGAAAGCAAAGTTTGAATT TAATGGAAAAACATGGGAAGAGGAATTTGTCTCTCAGGATGAGGAGTCGAAAGCTTCTACATATTCCTATGGTAGCCGGG TGGAAAATGCCTGGGATCAAGTGGCGTTGCAAGTTGGTAAAAGCGTGATTGATCATTTGACGAAATAG
Upstream 100 bases:
>100_bases CCTTGTGTCTTCGTTTTGTGTCTCGGCACTGATTTTTCTTTCAGGTTGCAGTGCTTCACTGCCTGTTGTTTCCGATCGTT TGTCCTATCAATATGAAGAA
Downstream 100 bases:
>100_bases AGGTAAATATTCTTTGAACATATAGCGCAGTATTCTGTGACATCTCGTGTGAAACCGGAGTGCGAGGCTGGTAGAGCGCG CAACACATGGCTGAGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAVGLKSSKTSTIGPVSLKWIPSDFPSRVDVQGASGYVGALSRTHVPTGIALSSRIKYVLDKTFGIDPNSSKVLTITVIE AKSTFSYGFSSARLSSGKCHLKAKFEFNGKTWEEEFVSQDEESKASTYSYGSRVENAWDQVALQVGKSVIDHLTK
Sequences:
>Translated_155_residues MAVGLKSSKTSTIGPVSLKWIPSDFPSRVDVQGASGYVGALSRTHVPTGIALSSRIKYVLDKTFGIDPNSSKVLTITVIE AKSTFSYGFSSARLSSGKCHLKAKFEFNGKTWEEEFVSQDEESKASTYSYGSRVENAWDQVALQVGKSVIDHLTK >Mature_154_residues AVGLKSSKTSTIGPVSLKWIPSDFPSRVDVQGASGYVGALSRTHVPTGIALSSRIKYVLDKTFGIDPNSSKVLTITVIEA KSTFSYGFSSARLSSGKCHLKAKFEFNGKTWEEEFVSQDEESKASTYSYGSRVENAWDQVALQVGKSVIDHLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16845; Mature: 16714
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGLKSSKTSTIGPVSLKWIPSDFPSRVDVQGASGYVGALSRTHVPTGIALSSRIKYVL CCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCEECCCCCCCCCCEEHHHHHHHHH DKTFGIDPNSSKVLTITVIEAKSTFSYGFSSARLSSGKCHLKAKFEFNGKTWEEEFVSQD HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHCCC EESKASTYSYGSRVENAWDQVALQVGKSVIDHLTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVGLKSSKTSTIGPVSLKWIPSDFPSRVDVQGASGYVGALSRTHVPTGIALSSRIKYVL CCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCEECCCCCCCCCCEEHHHHHHHHH DKTFGIDPNSSKVLTITVIEAKSTFSYGFSSARLSSGKCHLKAKFEFNGKTWEEEFVSQD HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHCCC EESKASTYSYGSRVENAWDQVALQVGKSVIDHLTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA