| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357254
Identifier: 119357254
GI number: 119357254
Start: 1649730
End: 1651178
Strand: Reverse
Name: 119357254
Synonym: Cpha266_1446
Alternate gene names: NA
Gene position: 1651178-1649730 (Counterclockwise)
Preceding gene: 119357255
Following gene: 119357253
Centisome position: 52.69
GC content: 55.21
Gene sequence:
>1449_bases TTGGCTCTCGACTATACCACCCTGAACCTGCTGCGTCAGAACCATCCTTCATGGAGGCTGTTGTGCGCCCAGCATGCACC GCTGGTGGCCGGGTTTCTGCATCGTGTTTTTATCGTGCCCAATGTGCGGATTCTCTCGCAGGCCGATCTGGTTGAGGCGC TTGAGGATGAGTTGTTTGCCTTGCGCCAGCAGCAGGGGGCAGATCTCTTTCCCGGTACGGCACAAAACTATCTGAACGAT TGGGCCGATAACGAGAAAGGGTGGTTGCGCAAATTCTACCCGGAAGGAACGGATGAGCCTCATTTTGACCTGACGGCGTC AACCGAAAAGGCGCTGGCCTGGCTGGAGGGGTTGACTGAACGTGCTTTTGTCGGCACGGAGTCGCGACTGCTTACCCTGT TTGAACTCTTGCGTCAGATGAGCACGGGAAGCCAGGCTGATCCTGAAGTGCGGATTGCTGAGCTGCAAAAGCGGCGTGAC GATATTGACGCTGAAATTGAGCGCATCCGTGCCGGGGAGATATCGCTGCTCGATGACACCGGTCTCAAGGATCGCTTTCA GCAGTTTCTGCAACTGGCCCGTGAACTGTTGACCGATTTTCGGGAGGTGGAGCATAATTTTCGAACTCTCGATCGCCGGG TGCGCGAGCGTATTGCTTTATGGGAAGGTTCGAAGGGGGCGCTTCTTGAAGAGATCATGGGCGAACGTGATGCTATCGCC GATTCGGATCAGGGAAAAAGTTTTCGGGCATTCTGGGATTTTCTCATGTCCCAGTCCCGTCAGGAGGAGTTGACCTTGCT TCTCGAAGAGGTGCTCGGCTTGCCCCCGATTATCGACATGAGCCCCGACAGCCGTTTGCGACGCGTTCACTACGACTGGC TGGAGGCCGGAGAGCATACCCAGCGCACGGTAGCCCGACTTTCCGAGCAGTTGCGCAGGTTTCTGGATGACAAGGCGTGG CTTGAGAATCGGCGTATTATGGATATACTGCACGAGATCGAAACCCATGCCCTTGAGTTGCGCGAAGATTCTCCTTCAGG CGGCTTCATGCCTCTTGACGGTTTTGCCGCGGTCATCGAGCTGCCTCTTGAAAGAGCGCTCTATCGTCCTCCATTCAGTC CAATGATTGCCGGTGTCGCTCTGGATGAAGGCGATGCGGAGATCGATACCGCTATTCTTTACGCCCAGGTAGTGGTCGAT CGGGTCGAGCTGTTGCGAAATATCCGCATGGAACTTCAGGTGCGCAATCAGGTCAGTATTGGCGAGGTGGTTGCACTTCA TCCGTTGCGAAACGGTCTGGCCGAACTGGTAGCCTATCTGCAACTTGCAGGGGAGTGGCCCCGGATGACTGTAGATGAGG GAGTAGAGGAAAAGGTAAGATGGCAGAGCGCGACGGGTATGACCCGACAGGCGATTTTGCCGCGAATTATTTTATTGAGA AACCAATGA
Upstream 100 bases:
>100_bases TAAAATCAATCCACAGAAAACCGCAGAAATATCTTTAACTTCCCCCCGAAATCCGGTTCGTATCCGGCGGCATTTTTTCA CCAGAATCAATAGCGCTCTT
Downstream 100 bases:
>100_bases CGAACCCATTAGACATTGATACTGGTCGACCGTCGTATCCTGTTCAGGAGCTCTCTTTCATCGTCATTCCACTGTTAAAA GGGGTGATTTATCAGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MALDYTTLNLLRQNHPSWRLLCAQHAPLVAGFLHRVFIVPNVRILSQADLVEALEDELFALRQQQGADLFPGTAQNYLND WADNEKGWLRKFYPEGTDEPHFDLTASTEKALAWLEGLTERAFVGTESRLLTLFELLRQMSTGSQADPEVRIAELQKRRD DIDAEIERIRAGEISLLDDTGLKDRFQQFLQLARELLTDFREVEHNFRTLDRRVRERIALWEGSKGALLEEIMGERDAIA DSDQGKSFRAFWDFLMSQSRQEELTLLLEEVLGLPPIIDMSPDSRLRRVHYDWLEAGEHTQRTVARLSEQLRRFLDDKAW LENRRIMDILHEIETHALELREDSPSGGFMPLDGFAAVIELPLERALYRPPFSPMIAGVALDEGDAEIDTAILYAQVVVD RVELLRNIRMELQVRNQVSIGEVVALHPLRNGLAELVAYLQLAGEWPRMTVDEGVEEKVRWQSATGMTRQAILPRIILLR NQ
Sequences:
>Translated_482_residues MALDYTTLNLLRQNHPSWRLLCAQHAPLVAGFLHRVFIVPNVRILSQADLVEALEDELFALRQQQGADLFPGTAQNYLND WADNEKGWLRKFYPEGTDEPHFDLTASTEKALAWLEGLTERAFVGTESRLLTLFELLRQMSTGSQADPEVRIAELQKRRD DIDAEIERIRAGEISLLDDTGLKDRFQQFLQLARELLTDFREVEHNFRTLDRRVRERIALWEGSKGALLEEIMGERDAIA DSDQGKSFRAFWDFLMSQSRQEELTLLLEEVLGLPPIIDMSPDSRLRRVHYDWLEAGEHTQRTVARLSEQLRRFLDDKAW LENRRIMDILHEIETHALELREDSPSGGFMPLDGFAAVIELPLERALYRPPFSPMIAGVALDEGDAEIDTAILYAQVVVD RVELLRNIRMELQVRNQVSIGEVVALHPLRNGLAELVAYLQLAGEWPRMTVDEGVEEKVRWQSATGMTRQAILPRIILLR NQ >Mature_481_residues ALDYTTLNLLRQNHPSWRLLCAQHAPLVAGFLHRVFIVPNVRILSQADLVEALEDELFALRQQQGADLFPGTAQNYLNDW ADNEKGWLRKFYPEGTDEPHFDLTASTEKALAWLEGLTERAFVGTESRLLTLFELLRQMSTGSQADPEVRIAELQKRRDD IDAEIERIRAGEISLLDDTGLKDRFQQFLQLARELLTDFREVEHNFRTLDRRVRERIALWEGSKGALLEEIMGERDAIAD SDQGKSFRAFWDFLMSQSRQEELTLLLEEVLGLPPIIDMSPDSRLRRVHYDWLEAGEHTQRTVARLSEQLRRFLDDKAWL ENRRIMDILHEIETHALELREDSPSGGFMPLDGFAAVIELPLERALYRPPFSPMIAGVALDEGDAEIDTAILYAQVVVDR VELLRNIRMELQVRNQVSIGEVVALHPLRNGLAELVAYLQLAGEWPRMTVDEGVEEKVRWQSATGMTRQAILPRIILLRN Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55421; Mature: 55290
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDYTTLNLLRQNHPSWRLLCAQHAPLVAGFLHRVFIVPNVRILSQADLVEALEDELFA CCCCHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LRQQQGADLFPGTAQNYLNDWADNEKGWLRKFYPEGTDEPHFDLTASTEKALAWLEGLTE HHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHH RAFVGTESRLLTLFELLRQMSTGSQADPEVRIAELQKRRDDIDAEIERIRAGEISLLDDT HHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCC GLKDRFQQFLQLARELLTDFREVEHNFRTLDRRVRERIALWEGSKGALLEEIMGERDAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHCCC DSDQGKSFRAFWDFLMSQSRQEELTLLLEEVLGLPPIIDMSPDSRLRRVHYDWLEAGEHT CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHH QRTVARLSEQLRRFLDDKAWLENRRIMDILHEIETHALELREDSPSGGFMPLDGFAAVIE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LPLERALYRPPFSPMIAGVALDEGDAEIDTAILYAQVVVDRVELLRNIRMELQVRNQVSI HHHHHHHCCCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GEVVALHPLRNGLAELVAYLQLAGEWPRMTVDEGVEEKVRWQSATGMTRQAILPRIILLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC NQ CC >Mature Secondary Structure ALDYTTLNLLRQNHPSWRLLCAQHAPLVAGFLHRVFIVPNVRILSQADLVEALEDELFA CCCHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LRQQQGADLFPGTAQNYLNDWADNEKGWLRKFYPEGTDEPHFDLTASTEKALAWLEGLTE HHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHH RAFVGTESRLLTLFELLRQMSTGSQADPEVRIAELQKRRDDIDAEIERIRAGEISLLDDT HHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCC GLKDRFQQFLQLARELLTDFREVEHNFRTLDRRVRERIALWEGSKGALLEEIMGERDAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHCCC DSDQGKSFRAFWDFLMSQSRQEELTLLLEEVLGLPPIIDMSPDSRLRRVHYDWLEAGEHT CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHH QRTVARLSEQLRRFLDDKAWLENRRIMDILHEIETHALELREDSPSGGFMPLDGFAAVIE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LPLERALYRPPFSPMIAGVALDEGDAEIDTAILYAQVVVDRVELLRNIRMELQVRNQVSI HHHHHHHCCCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GEVVALHPLRNGLAELVAYLQLAGEWPRMTVDEGVEEKVRWQSATGMTRQAILPRIILLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC NQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA