| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357251
Identifier: 119357251
GI number: 119357251
Start: 1644568
End: 1645743
Strand: Reverse
Name: 119357251
Synonym: Cpha266_1443
Alternate gene names: NA
Gene position: 1645743-1644568 (Counterclockwise)
Preceding gene: 119357252
Following gene: 119357250
Centisome position: 52.51
GC content: 56.29
Gene sequence:
>1176_bases ATGAACTGGACAACCCCTGCCGAACTCAAGGCCCAGGTTCAGAAACTCTGGGATCGGGGCCTCATCCTCTCCGCTCTGAC CAACGGCGAAGAACTTTTCCCCCGTCGCCTGACGCTGAAAGGGCCCGACTCCAGAGAGTTAAGCAACTCTTTTGCCGAAG TACGCGACTGGATTATGCGACTTTCCGGTGCTGCCAAACAGTACCGGATTGTATGGCGCACGGTCAATCACCGCATTCTG GGAGCCAATGAACTTCCGGCGGAAATCTGGATCGATTCACTCGACGACGCCCTCGGGCTTATTGGCAAACAGCGAGAAGC CCGGCAATTTGCCGCCATGGTCACGCTCACCCGCGACTGGCAACCCGCACTTCTACCCTGGCTCGCAAAACGCCCCCTGC GAGCCCTCGAACTGGCCGAAGAGTGGTCGCATATTCTCGAAATTGTCGCCTGGCGTCTCAAACATCCCCACCCGGATATC TACCTGCGCCAGATCGACCTGTCCGGCGTGCACAGCAAGTTCATCGAAGGGCACCGGGGCGTACTTGGGGAGCTCTTCGA CCTCCTCCTTCCACCGGAGGAGATTGACGCAACGGTTACAGGAGCCGGAGGGTTCTCTCTCCGTTACGGCTTTAGGGACA AACCCCTCCGGGTGCGATTCCGAATCCTCGACCCGAAACTGGCGCTTCTCCCGACGAATACCGATCAGGATATCACCCTG ACGCAGGCAACGTTTGCCCGACTTGAAATCCCCGTTACAAAAATCTTCATCACCGAAAACGAAATCAATTTCCTGGCCTT CCCTGAGGTTCCCGAGGCAATGGTGATTTTCGGAGCAGGGTATGGTTTTGAGAACATGGCTTCAGTCGAGTGGATGCGTG ACCGTGTTATCCACTACTGGGGAGACATCGATACCCACGGTATGGCAATCCTCAACCAGTTACGGAGATTCTTTCCGCAG GCCGCCTCTCTTCTGATGGACCATGAGACGCTGATGGAGCACCAACCGCTTTGGGGCGCTGAACCATCTCCCGAAACCGG TACGCTCACGCGCCTGACCGCTCAAGAGGGTGCGCTTTATGATCAGTTACGACGAAATGAACTGGGCAGTCGAATTCGGC TGGAGCAGGAGAAGATCGGGTTTGAGTGGCTGGTTGAGGCGTTAAAAAAGCTCTAA
Upstream 100 bases:
>100_bases TCTCCAGCGTAGGCTTTGTGCACAATCAGGAAGGGCGCTGCTCGGTATTGCGCAACCTCACCATCGAAGAGTATCGCGCC GAAAAAGAGAAGGCGGCAGA
Downstream 100 bases:
>100_bases TCACGATTATCGAATATTTATCGGATGATTATTATCAGATAATTATGTTTTGAGGACATAATGTCGTCCTCGCAGTGACT TGCGACAGAAATTCATGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNWTTPAELKAQVQKLWDRGLILSALTNGEELFPRRLTLKGPDSRELSNSFAEVRDWIMRLSGAAKQYRIVWRTVNHRIL GANELPAEIWIDSLDDALGLIGKQREARQFAAMVTLTRDWQPALLPWLAKRPLRALELAEEWSHILEIVAWRLKHPHPDI YLRQIDLSGVHSKFIEGHRGVLGELFDLLLPPEEIDATVTGAGGFSLRYGFRDKPLRVRFRILDPKLALLPTNTDQDITL TQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYWGDIDTHGMAILNQLRRFFPQ AASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALYDQLRRNELGSRIRLEQEKIGFEWLVEALKKL
Sequences:
>Translated_391_residues MNWTTPAELKAQVQKLWDRGLILSALTNGEELFPRRLTLKGPDSRELSNSFAEVRDWIMRLSGAAKQYRIVWRTVNHRIL GANELPAEIWIDSLDDALGLIGKQREARQFAAMVTLTRDWQPALLPWLAKRPLRALELAEEWSHILEIVAWRLKHPHPDI YLRQIDLSGVHSKFIEGHRGVLGELFDLLLPPEEIDATVTGAGGFSLRYGFRDKPLRVRFRILDPKLALLPTNTDQDITL TQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYWGDIDTHGMAILNQLRRFFPQ AASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALYDQLRRNELGSRIRLEQEKIGFEWLVEALKKL >Mature_391_residues MNWTTPAELKAQVQKLWDRGLILSALTNGEELFPRRLTLKGPDSRELSNSFAEVRDWIMRLSGAAKQYRIVWRTVNHRIL GANELPAEIWIDSLDDALGLIGKQREARQFAAMVTLTRDWQPALLPWLAKRPLRALELAEEWSHILEIVAWRLKHPHPDI YLRQIDLSGVHSKFIEGHRGVLGELFDLLLPPEEIDATVTGAGGFSLRYGFRDKPLRVRFRILDPKLALLPTNTDQDITL TQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYWGDIDTHGMAILNQLRRFFPQ AASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALYDQLRRNELGSRIRLEQEKIGFEWLVEALKKL
Specific function: Unknown
COG id: COG4924
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44898; Mature: 44898
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWTTPAELKAQVQKLWDRGLILSALTNGEELFPRRLTLKGPDSRELSNSFAEVRDWIMR CCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH LSGAAKQYRIVWRTVNHRILGANELPAEIWIDSLDDALGLIGKQREARQFAAMVTLTRDW HHCCHHHHEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCC QPALLPWLAKRPLRALELAEEWSHILEIVAWRLKHPHPDIYLRQIDLSGVHSKFIEGHRG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC VLGELFDLLLPPEEIDATVTGAGGFSLRYGFRDKPLRVRFRILDPKLALLPTNTDQDITL HHHHHHHHHCCHHHHCEEEECCCCCEEECCCCCCCEEEEEEEECCEEEEEECCCCCCEEE TQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYW EHHHHHHEECCEEEEEEEECCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GDIDTHGMAILNQLRRFFPQAASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHH DQLRRNELGSRIRLEQEKIGFEWLVEALKKL HHHHHHHCCCCEEEHHHHCCHHHHHHHHHCC >Mature Secondary Structure MNWTTPAELKAQVQKLWDRGLILSALTNGEELFPRRLTLKGPDSRELSNSFAEVRDWIMR CCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH LSGAAKQYRIVWRTVNHRILGANELPAEIWIDSLDDALGLIGKQREARQFAAMVTLTRDW HHCCHHHHEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCC QPALLPWLAKRPLRALELAEEWSHILEIVAWRLKHPHPDIYLRQIDLSGVHSKFIEGHRG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC VLGELFDLLLPPEEIDATVTGAGGFSLRYGFRDKPLRVRFRILDPKLALLPTNTDQDITL HHHHHHHHHCCHHHHCEEEECCCCCEEECCCCCCCEEEEEEEECCEEEEEECCCCCCEEE TQATFARLEIPVTKIFITENEINFLAFPEVPEAMVIFGAGYGFENMASVEWMRDRVIHYW EHHHHHHEECCEEEEEEEECCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GDIDTHGMAILNQLRRFFPQAASLLMDHETLMEHQPLWGAEPSPETGTLTRLTAQEGALY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHH DQLRRNELGSRIRLEQEKIGFEWLVEALKKL HHHHHHHCCCCEEEHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA